| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2739 |
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| Symbol | hslU |
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| ID | 6987903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2964469 |
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| End bp | 2965803 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381008 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_002264075 |
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| Protein GI | 209696145 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACTCCTCG TGAAATTGTA CACGAATTAG ATAGCCATAT TATTGGTCAA
GATAAAGCAA AACGATCAGT CGCCATTGCA TTACGTAACC GCTGGCGTCG AATGCAACTT
CAACCAGAAT TACGCGCAGA AGTAACGCCT AAAAACATTT TAATGATCGG ACCTACAGGT
GTCGGTAAAA CAGAGATTGC TCGTCGTTTA GCAAAACTAG CCAATGCACC GTTCATTAAA
GTAGAAGCGA CTAAATTCAC AGAAGTCGGT TATGTAGGCA AAGAAGTCGA CAGCATCATT
CGTGATTTAA CCGATGTCGC GATCAAAATG ACACATCAAC AGGCGGTAGA AAAAGTAAAA
TTCCGCGCTG AAGAGCAAGC TGAAGATCGT ATCCTTGATA TTTTATTACC ACCCGCTCGC
GATGCATGGG GTAAGAATGA AGAAGGTGAT AATGACTCTG GCACTCGTCA ATCTTTCCGT
AAGAAATTGC GTGAAGGCAA ATTAGACGAT AAAGAGATTG ATGTTGATGT TGCTGCACCT
CAAGTGGGTG TCGAAATCAT GGCTCCTCCA GGCATGGAAG AAATGACGAA CCAACTTCAG
GGCATGTTTC AGAACCTATC TGGTGGCGAA ACAACGAAAA AGCGCAAGAT GAAAATCAAA
GATGCGCTTA AAGCCCTTGC TGAAGAAGAA GGCGCTAAAT TAGTCAACCC TGAAGAGCTA
AAAGAACAAG CCATATTTAA CGTAGAAAAT CACGGCATCG TCTTTATTGA TGAGATCGAT
AAAATCTGCA AAGGATCAAA TTCTCAATCT GGTGATGTAT CTCGCGAAGG CGTTCAACGT
GACCTTCTTC CATTAGTGGA AGGCAGCACA GTAAGCACGA AACACGGCAT GGTTAGAACT
GATCACATGC TATTCATCAC ATCAGGTGCA TTCCAAATGG CGAAACCATC CGATTTGATC
CCTGAATTAC AAGGTCGCTT ACCGATCCGT GTTGAGCTAG AAGCGCTAAC GGCAAATGAC
TTTAAGCGTA TTTTAACCGA GCCAAATGCC TCACTAACTG AGCAATACAT CGCTCTATTA
GCGACTGAAA ATGTCAATAT CGAATTTACT GAAGATGGTA TTAGTCGTAT TGCAGAGTCT
GCATTTAGAG TTAATGAAAC GACAGAGAAC ATCGGTGCTC GTCGTTTGCA CACCGTAATG
GAACGTCTAA TGGAAGAGAT TTCTTATGAT GCTTCAGAGA AAGGCGGTGA CAGCTTAACG
GTAGATGACG CTTATGTAAC CTCTCGTTTA GGTGAATTAA TTGAAAATGA AGACTTAAGT
CGCTTCATTT TGTAA
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| Protein sequence | MSEMTPREIV HELDSHIIGQ DKAKRSVAIA LRNRWRRMQL QPELRAEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDVAIKM THQQAVEKVK
FRAEEQAEDR ILDILLPPAR DAWGKNEEGD NDSGTRQSFR KKLREGKLDD KEIDVDVAAP
QVGVEIMAPP GMEEMTNQLQ GMFQNLSGGE TTKKRKMKIK DALKALAEEE GAKLVNPEEL
KEQAIFNVEN HGIVFIDEID KICKGSNSQS GDVSREGVQR DLLPLVEGST VSTKHGMVRT
DHMLFITSGA FQMAKPSDLI PELQGRLPIR VELEALTAND FKRILTEPNA SLTEQYIALL
ATENVNIEFT EDGISRIAES AFRVNETTEN IGARRLHTVM ERLMEEISYD ASEKGGDSLT
VDDAYVTSRL GELIENEDLS RFIL
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