Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2713 |
Symbol | |
ID | 6987895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2938224 |
End bp | 2938952 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380983 |
Product | hybrid peroxiredoxin (thioredoxin reductase) |
Protein accession | YP_002264050 |
Protein GI | 209696120 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin [COG0695] Glutaredoxin and related proteins |
TIGRFAM ID | [TIGR02190] Glutaredoxin-family domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACAT CTAAAGAAGG CCAATCAGTT CCTCAAGTAA CTTTTCCAAC ACGTAAAGGT GACGCTTGGG TTAACGTAAC AACAGAAGAA CTATTCAAAG ACAAAACCGT TATCGTATTC AGTCTTCCTG GTGCATTTAC TCCAACATGT TCTTCAAGCC ACTTACCTCG TTACAACGAG CTTTATTCTG TATTTAAAGA CAACGGCGTT GATGAAATCG TTTGTGTCTC TGTAAACGAT ACGTTTGTAA TGAACGCATG GAAAGCAGAC CAAGAAGCAG AAAACATTAC CTTCATTCCA GATGGTAACG GCGATTTCAC CGATGGTATG GGCATGTTAG TTGAGAAAAA TGACATTGGT TTTGGTAAGC GTTCATGGCG TTACAGCATG TTAGTGAAAA ACGGCATCGT TGAAAAAATG TTCATCGAAG AAAACGTACC GGGTGACCCG TTCAAAGTTT CTGATGCAGA TACGATGCTG AACTACCTTG CTCCTGAGCA CAAAGAGCAA GAATCAATCA CTGTATTTAC AAAACCTGGT TGTCCTTTCT GTATGAAAGC CAAACAAACT TTGATTGATA AAGGCCTAAA CTACGAAGAA GTGGTACTGG GTAAAGATGC AACGACAGTA AGCCTACGTG CAATTACTGG TCGCACTACC GTTCCTCAAG TATTCATCGG TGGCAAACAC ATTGGTGGTA GCGAAGAGCT TGAAGTGTTC CTAGCTTAA
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Protein sequence | MFTSKEGQSV PQVTFPTRKG DAWVNVTTEE LFKDKTVIVF SLPGAFTPTC SSSHLPRYNE LYSVFKDNGV DEIVCVSVND TFVMNAWKAD QEAENITFIP DGNGDFTDGM GMLVEKNDIG FGKRSWRYSM LVKNGIVEKM FIEENVPGDP FKVSDADTML NYLAPEHKEQ ESITVFTKPG CPFCMKAKQT LIDKGLNYEE VVLGKDATTV SLRAITGRTT VPQVFIGGKH IGGSEELEVF LA
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