Gene VSAL_I2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2696 
SymboldnaG 
ID6987884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2917267 
End bp2919027 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content41% 
IMG OID643380966 
ProductDNA primase 
Protein accessionYP_002264034 
Protein GI209696104 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00323272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGAC ATATCCCTCG TAGTTTTATT GATGAACTTT TAAATCGACA CGATATTGTC 
GACATCATCG ACACTAGAGT AAAACTAAAA AAACAAGGGA AAAACTACGG TGCTTGTTGC
CCTTTTCATA ATGAAAAAAG TCCTTCTTTC TCTGTAAGCC AAGAAAAGCA ATTCTATCAC
TGCTTTGGCT GTGGCGTTCA TGGTAATGCC ATTGATTTCT TAATGGAATT CGACCGTCTT
GAGTTTGTAG AAGCCATCGA AGAACTTGCT TCAATGCTTG GTTTAGATGT TCCTCGCGAA
CAGCGTAGTG GCTTTAGTGC GCCTTCTGGC CCAACCGCAA ATTCAGAACA AAAACGCAGT
TTATACGATC TAATGGGCGG TATTAGTCAG TTTTATCGTT CTCAATTAAA ATCCGCTAAT
AACATTGTTG CAATTAACTA CCTTAAAGAA CGCGGTCTCT CTAGTGAGAT TGCTCAAAAA
TTTGGGGTTG GTTATATTGC TGATGAATGG GAATTAGTGA AAAATAACTT CGGTCGCGAC
AAAGCATCAC AAGATGCTTT AGTGAGTGGC GGGATGTTAA TTGAAAACGA TAAAGGGCGA
CGCTATGATC GCTTTCGTGG TCGAGTCATG TTTCCTATTC GAGATCGTCG CGGACGCGTT
ATTGGTTTTG GTGGTCGAGT TATTGGTGAA GGTACACCGA AATACTTAAA TTCTCCAGAA
ACGCCTATTT TCCATAAAGG CAAAGAACTT TATGGCTTAT ACGAAGCATT ACAAGCGTAT
AAAGACCTGC CTCAAGCTTT GGTTGTTGAA GGCTATATGG ATGTTGTCGC CCTTGCTCAA
TTCGGTGTAG ATTATGCCGT TGCCTCCCTA GGCACAGCAA CTACCGGCGA TCATATGCAA
TTACTTTTCC GTCAAACAAG CACTGTCGTA TGTTGTTACG ATGGAGACAG AGCGGGTCGG
GAAGCGGCAT GGCGAGCAAT GGAACAAGCG CTTCCCTACC TCAATGATGG CCGCCAATTA
AAATTCATGT TTTTACCCGA CGGTGAAGAT CCAGATACCT ATATCCGTCA ATATGGTAAA
GAAGCCTTCG AGCGAGAAAT CGCTCAATCT GAATCATTGA TTAATTTCAT GTTTAGAAGC
TTGATTGATC AAGTAGATAC AAGCAGCCGA GAAGGCAAAG CAAAACTCAC AACACTTGCT
GTTCCTCTCA TAGACAAAGT TCCTGGTGGT ACGTTACGCC TTTATTTACG TGAGCAACTT
GGCAAAACGC TTGGAATTAT GGATGAAAGC CAATTACAGC AACTAATATC TAAACAAGGT
GCTCCTGAAA CCAAGCGACA GGTACAACCA GATATTAAAC GAACAGCGAT GCGCGAAGTC
ATTACGTTGT TATTACAAAA TCCAAATTTA GCTCAATTAG TCCCAGATTT AAGCAGTGTT
CAAGATATTC CACTGCCGGG TTTAAGTTTA TTTCTACAAT TACTTGAAAA TTGCCGACAT
AATCCCCATA TCACTACAGG CCAATTATTA GAATATTGGC GCGGTGATAA AAATGAAAAA
CTATTATCAC GCTTGGCAGC ATGGGAACTC CATATAGACC AAGACAATAT ACAAGATGTA
TTTATGGATT CGCTGGACAA CATTTTAGCC CAGTGCATCA ACCAACAAAT TGAAAGTTTG
CAGACGAAAG AAAGAACGCT TGGCTTATCA GTCGAAGAAA AACGGGAGCT ACTAGCCTTA
ATGCTAGAAT TAAAAGCATA G
 
Protein sequence
MSGHIPRSFI DELLNRHDIV DIIDTRVKLK KQGKNYGACC PFHNEKSPSF SVSQEKQFYH 
CFGCGVHGNA IDFLMEFDRL EFVEAIEELA SMLGLDVPRE QRSGFSAPSG PTANSEQKRS
LYDLMGGISQ FYRSQLKSAN NIVAINYLKE RGLSSEIAQK FGVGYIADEW ELVKNNFGRD
KASQDALVSG GMLIENDKGR RYDRFRGRVM FPIRDRRGRV IGFGGRVIGE GTPKYLNSPE
TPIFHKGKEL YGLYEALQAY KDLPQALVVE GYMDVVALAQ FGVDYAVASL GTATTGDHMQ
LLFRQTSTVV CCYDGDRAGR EAAWRAMEQA LPYLNDGRQL KFMFLPDGED PDTYIRQYGK
EAFEREIAQS ESLINFMFRS LIDQVDTSSR EGKAKLTTLA VPLIDKVPGG TLRLYLREQL
GKTLGIMDES QLQQLISKQG APETKRQVQP DIKRTAMREV ITLLLQNPNL AQLVPDLSSV
QDIPLPGLSL FLQLLENCRH NPHITTGQLL EYWRGDKNEK LLSRLAAWEL HIDQDNIQDV
FMDSLDNILA QCINQQIESL QTKERTLGLS VEEKRELLAL MLELKA