Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2696 |
Symbol | dnaG |
ID | 6987884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2917267 |
End bp | 2919027 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380966 |
Product | DNA primase |
Protein accession | YP_002264034 |
Protein GI | 209696104 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00323272 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGAC ATATCCCTCG TAGTTTTATT GATGAACTTT TAAATCGACA CGATATTGTC GACATCATCG ACACTAGAGT AAAACTAAAA AAACAAGGGA AAAACTACGG TGCTTGTTGC CCTTTTCATA ATGAAAAAAG TCCTTCTTTC TCTGTAAGCC AAGAAAAGCA ATTCTATCAC TGCTTTGGCT GTGGCGTTCA TGGTAATGCC ATTGATTTCT TAATGGAATT CGACCGTCTT GAGTTTGTAG AAGCCATCGA AGAACTTGCT TCAATGCTTG GTTTAGATGT TCCTCGCGAA CAGCGTAGTG GCTTTAGTGC GCCTTCTGGC CCAACCGCAA ATTCAGAACA AAAACGCAGT TTATACGATC TAATGGGCGG TATTAGTCAG TTTTATCGTT CTCAATTAAA ATCCGCTAAT AACATTGTTG CAATTAACTA CCTTAAAGAA CGCGGTCTCT CTAGTGAGAT TGCTCAAAAA TTTGGGGTTG GTTATATTGC TGATGAATGG GAATTAGTGA AAAATAACTT CGGTCGCGAC AAAGCATCAC AAGATGCTTT AGTGAGTGGC GGGATGTTAA TTGAAAACGA TAAAGGGCGA CGCTATGATC GCTTTCGTGG TCGAGTCATG TTTCCTATTC GAGATCGTCG CGGACGCGTT ATTGGTTTTG GTGGTCGAGT TATTGGTGAA GGTACACCGA AATACTTAAA TTCTCCAGAA ACGCCTATTT TCCATAAAGG CAAAGAACTT TATGGCTTAT ACGAAGCATT ACAAGCGTAT AAAGACCTGC CTCAAGCTTT GGTTGTTGAA GGCTATATGG ATGTTGTCGC CCTTGCTCAA TTCGGTGTAG ATTATGCCGT TGCCTCCCTA GGCACAGCAA CTACCGGCGA TCATATGCAA TTACTTTTCC GTCAAACAAG CACTGTCGTA TGTTGTTACG ATGGAGACAG AGCGGGTCGG GAAGCGGCAT GGCGAGCAAT GGAACAAGCG CTTCCCTACC TCAATGATGG CCGCCAATTA AAATTCATGT TTTTACCCGA CGGTGAAGAT CCAGATACCT ATATCCGTCA ATATGGTAAA GAAGCCTTCG AGCGAGAAAT CGCTCAATCT GAATCATTGA TTAATTTCAT GTTTAGAAGC TTGATTGATC AAGTAGATAC AAGCAGCCGA GAAGGCAAAG CAAAACTCAC AACACTTGCT GTTCCTCTCA TAGACAAAGT TCCTGGTGGT ACGTTACGCC TTTATTTACG TGAGCAACTT GGCAAAACGC TTGGAATTAT GGATGAAAGC CAATTACAGC AACTAATATC TAAACAAGGT GCTCCTGAAA CCAAGCGACA GGTACAACCA GATATTAAAC GAACAGCGAT GCGCGAAGTC ATTACGTTGT TATTACAAAA TCCAAATTTA GCTCAATTAG TCCCAGATTT AAGCAGTGTT CAAGATATTC CACTGCCGGG TTTAAGTTTA TTTCTACAAT TACTTGAAAA TTGCCGACAT AATCCCCATA TCACTACAGG CCAATTATTA GAATATTGGC GCGGTGATAA AAATGAAAAA CTATTATCAC GCTTGGCAGC ATGGGAACTC CATATAGACC AAGACAATAT ACAAGATGTA TTTATGGATT CGCTGGACAA CATTTTAGCC CAGTGCATCA ACCAACAAAT TGAAAGTTTG CAGACGAAAG AAAGAACGCT TGGCTTATCA GTCGAAGAAA AACGGGAGCT ACTAGCCTTA ATGCTAGAAT TAAAAGCATA G
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Protein sequence | MSGHIPRSFI DELLNRHDIV DIIDTRVKLK KQGKNYGACC PFHNEKSPSF SVSQEKQFYH CFGCGVHGNA IDFLMEFDRL EFVEAIEELA SMLGLDVPRE QRSGFSAPSG PTANSEQKRS LYDLMGGISQ FYRSQLKSAN NIVAINYLKE RGLSSEIAQK FGVGYIADEW ELVKNNFGRD KASQDALVSG GMLIENDKGR RYDRFRGRVM FPIRDRRGRV IGFGGRVIGE GTPKYLNSPE TPIFHKGKEL YGLYEALQAY KDLPQALVVE GYMDVVALAQ FGVDYAVASL GTATTGDHMQ LLFRQTSTVV CCYDGDRAGR EAAWRAMEQA LPYLNDGRQL KFMFLPDGED PDTYIRQYGK EAFEREIAQS ESLINFMFRS LIDQVDTSSR EGKAKLTTLA VPLIDKVPGG TLRLYLREQL GKTLGIMDES QLQQLISKQG APETKRQVQP DIKRTAMREV ITLLLQNPNL AQLVPDLSSV QDIPLPGLSL FLQLLENCRH NPHITTGQLL EYWRGDKNEK LLSRLAAWEL HIDQDNIQDV FMDSLDNILA QCINQQIESL QTKERTLGLS VEEKRELLAL MLELKA
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