| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2689 |
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| Symbol | cca |
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| ID | 6988459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2911481 |
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| End bp | 2912704 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380959 |
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| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
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| Protein accession | YP_002264027 |
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| Protein GI | 209696097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.289475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTT ATTTAGTAGG TGGTGCAGTT CGAGATTCAC TCCTCAATAT TGACGTAAAA
GATAAAGATT GGGTCGTTGT TGGTTCTACA CCCACTCACA TGAATTCGCT TGGCTACCAA
AGCGTAGGGC AAGACTTTCC TGTTTTCTTA CACCCAAGAA CAAAAGAAGA ATACGCCTTA
GCCAGAACAG AACGAAAAAG TGGTCAAGGA TATAAAGGAT TCACTTGTTA CGCAGAAGCA
GATGTCACAT TAGAAGAAGA TTTGTTGCGT CGAGATTTGA CGATTAATGC GATAGCTCAA
TCAGATAAGG GCCTATTAAT TGATCCTTAC CATGGGCAAG AAGATTTAAA GAATCGGTTA
TTACGCCATG TATCCAATGC CTTTGTCGAA GACCCGTTAC GGGTACTACG AGTTGCTCGT
TTTGCCGCTC GCTTTCATTA TCTTGGTTTT ACAATTGCAC CAGAAACAAT GCAATTAATG
AAAACACTTG TTTCGAGTGG CGAGCTCTCT CATTTAACCC CAGAACGAGT ATGGCAAGAA
TGGGAAAAAT CATTATCAAG TAAACACCCA AATATTTTTC TTTCTGTACT CAAAGAATGT
GGTGCATTAG CGGTCGTATT GCCGGAAATT GATGCTTTAT TTGGCGTTCC TCAACCAGAA
CAATGGCACC CAGAAATTGA TACTGGAATG CATACATTGA TGGTTTCTCA GCAAGCATCA
TTACTAAGTA CCTCACTTCC AATACGCTTT GCAGCGCAAG TTCATGATTT AGGTAAGGGG
ATTACTCCTG AATCAGAATG GCCAAGCCAC AAAATGCATT GCCATACAGG GATAAAAGTA
ATCAAGAATT TGTGTAAGCG AGTTCGAGTC CCTAATGAAT ACAAAGAGCT AGCCTTATTG
GTTTGTGAGC ATCACACAAA TGTCCACAGA GCTTCAGAAC TACGAGCACA AACCTTTATC
AAGATATTCG ATAAAATGGA CTTATGGCGT AAACCAGAAC GTTTAGAATC GATTCTATTG
TGCTGCCAAG CCGATCATGC AGGGCGACTA GGGTTAGAGT TAAATCCATA CCCTCAAAAA
GAACGAATGG AATCCGCATT TAATGCAGCA CAACATGTAG AGGTAAAAGA AGTGGTCGCA
GCAGGGTTTA AAGGACCAGA AATCAGAGAT GAATTAACCA AGAGAAGAAT TGAAGCTGTC
AAAGTGGCAC TTTTAATAAA CTAG
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| Protein sequence | MQIYLVGGAV RDSLLNIDVK DKDWVVVGST PTHMNSLGYQ SVGQDFPVFL HPRTKEEYAL
ARTERKSGQG YKGFTCYAEA DVTLEEDLLR RDLTINAIAQ SDKGLLIDPY HGQEDLKNRL
LRHVSNAFVE DPLRVLRVAR FAARFHYLGF TIAPETMQLM KTLVSSGELS HLTPERVWQE
WEKSLSSKHP NIFLSVLKEC GALAVVLPEI DALFGVPQPE QWHPEIDTGM HTLMVSQQAS
LLSTSLPIRF AAQVHDLGKG ITPESEWPSH KMHCHTGIKV IKNLCKRVRV PNEYKELALL
VCEHHTNVHR ASELRAQTFI KIFDKMDLWR KPERLESILL CCQADHAGRL GLELNPYPQK
ERMESAFNAA QHVEVKEVVA AGFKGPEIRD ELTKRRIEAV KVALLIN
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