| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2626 |
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| Symbol | pdhR |
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| ID | 6988215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2842192 |
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| End bp | 2842962 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380897 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_002263965 |
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| Protein GI | 209696035 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATATC AAAGGATCCG TCAGCCAAAA TTGTCCGATG CAATCGAACA AGAACTTGAA
CGGCTGATAT TAGAAGGAAC CCTTTCTCCG GGACAGAAGT TACCCGCAGA AAGAGAGTTA
GCAAAACAAT TTGATGTTTC TCGTCCTTCT GTGCGAGAGG CAATACAACG TTTAGAAGCG
AAGCATTTAT TAACTCGCCG TCAAGGTGGT GGTACGTTTG TTAATAAAGG CTTGTGGCAA
AGCTTTTCAG AGCCGTTGCT CGATTTATTG GCAACACACC CTGAAACGCA ATTTGACTTA
CTGGAATCGC GTCACGCGTT AGAAGGTATT TCTGCTTATT ACGCGGCTTT ACGTGGTAAT
GAAGAAGATT TCAAACGGAT TAAAGAGTCA CATGAATTAA TCCAACAAGC GCAACAGGAT
GGTGATTTAA AAGCAGAAGC CTCTGCGGTT ATGCACTGTC TTATTACGGT CACTGAATCA
GCGCATAATG TGGTATTACT TCACATGGTG CGCAGTTTAG AGCCGTTGCT TGAGCAAAAC
GTATTACAAA ACTTTACCTT ATTAAATCGT CGCGAAGCGG TGGTTGAAAA GGTGAGAGCA
CATAGAGCAG AAATGGTAGA AGCGATTGTG TCAGGAAAGC CTGAAGAGGC TCGTTTGGCA
TCTCATTCTC ATCTTGCTTA TATTGAAGAA ACATTGTTGG AATTGACAAA AGAAGAGAGT
CGCCGAGAGT GCTCACTTCG TCGAATTCAA CAAAGTAATG ACATGAATTA A
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| Protein sequence | MAYQRIRQPK LSDAIEQELE RLILEGTLSP GQKLPAEREL AKQFDVSRPS VREAIQRLEA
KHLLTRRQGG GTFVNKGLWQ SFSEPLLDLL ATHPETQFDL LESRHALEGI SAYYAALRGN
EEDFKRIKES HELIQQAQQD GDLKAEASAV MHCLITVTES AHNVVLLHMV RSLEPLLEQN
VLQNFTLLNR REAVVEKVRA HRAEMVEAIV SGKPEEARLA SHSHLAYIEE TLLELTKEES
RRECSLRRIQ QSNDMN
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