Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2607 |
Symbol | pcnB |
ID | 6987844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2823105 |
End bp | 2824430 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380882 |
Product | poly(A) polymerase (plasmid copy number protein) |
Protein accession | YP_002263950 |
Protein GI | 209696020 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000156252 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTGA ACGTTATCAC ACGCCAAGAA CATAATATTT CACGTAAAGA CTTAAGTGAT AATGCACTCA AAGTTCTTTA CCGCCTAAGC AATGCTGGAT ACGACGCCTA TCTAGTAGGA GGAGGTGTGC GCGATATAAT TCTAGGACAA GAACCTAAAG ATTTTGATAT CGCCACCAAT GCCACTCCCG AGCAAATCAA AAAACTATTT AGAAATTGCC GATTGATTGG CCGTAGATTC CGTCTTGCTC ATATTCTTTT TGGCAGAGAT GTCATTGAGG TTGCCACTTT CCGTGGTCAC CATAAAGAAG AAGAATCAGA GAAAAAGAAC ATCTCTTCTC AATCAAAAGA AGGCATGTTA TTGCGTGATA ATGTCTATGG CACCGTTGAA GAAGATGCCC AACGTCGTGA CTTTACGATT AATGCGATGT ATTACAACAT TGCAGATTAC TCAATTCATG ATTATGCCAA TGGCATTGAA GATTTAAAAA ATGGTGTCGT ACGTCTTATC GGTGATCCTG AAACTCGTTA TCGAGAAGAT CCTGTTCGAA TGCTACGTGC GGTACGCTTT GCTGCAAAAT TAGACATGAC AATTTGCAAT AAAACCGCAG AACCAATGGT TGAATTGTCC CCACTTTTAC GTGATATCCC TGCGGCTCGT TTATTTGAAG AATCACTTAA ACTACTTCAA GCAGGAAAAG GCTTAAATAC CTATTTAATG CTGCGTAAAT TTAACTTGTT TCAACAGTTG TTTCCCGCGC TTACGCCATT TTTAACAAAA GAAGGCAACA GTCAAACGGA ACAAATGATC GAACTTGTAT TACATTCAAC AGACAAACGT ATAAATAGCG GTCAACGAGT TAACCCTGCA TTCATGTTTG CAGCAATGTT ATGGTATCCA TTAACGGCTC AAGCAAAAGA AATTCAAAAC GAAAATAGCA AACTTGATGA ATACGAATCC ATTATGGAAG CGTCTAATAT CATGCTTGAT ATTCAAGTAA AAAGCACGGC GGTCCCTCGT CGCTTAACCG CGACTATTCG TGATATTTGG CAATTACAAC TCCGTTTACC TCGTCGTACT GGTAAACGTG CGTTTATTCT TATTGACCAA CAAAAATTCC GTGCTGCTTA TGATTTCCTT GAAATGCGTG GAAAAGTAGA AGGTGGTGAT GTAAAAGCAC TCGCTGAATG GTGGACTGAA TTCCAGGACG CACCCGTTCC ACACCGTAAT AACATGATTC AAGGCTTACA TGGTGGCCGT TCAACCGGTA CACGTAAACG TCGTAGCCCT TATCGTAAGA AAAAAAGAAC GAATAACGAT TCATGA
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Protein sequence | MKLNVITRQE HNISRKDLSD NALKVLYRLS NAGYDAYLVG GGVRDIILGQ EPKDFDIATN ATPEQIKKLF RNCRLIGRRF RLAHILFGRD VIEVATFRGH HKEEESEKKN ISSQSKEGML LRDNVYGTVE EDAQRRDFTI NAMYYNIADY SIHDYANGIE DLKNGVVRLI GDPETRYRED PVRMLRAVRF AAKLDMTICN KTAEPMVELS PLLRDIPAAR LFEESLKLLQ AGKGLNTYLM LRKFNLFQQL FPALTPFLTK EGNSQTEQMI ELVLHSTDKR INSGQRVNPA FMFAAMLWYP LTAQAKEIQN ENSKLDEYES IMEASNIMLD IQVKSTAVPR RLTATIRDIW QLQLRLPRRT GKRAFILIDQ QKFRAAYDFL EMRGKVEGGD VKALAEWWTE FQDAPVPHRN NMIQGLHGGR STGTRKRRSP YRKKKRTNND S
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