Gene VSAL_I2605 details

Gene Information

• Locus tag: VSAL_I2605
• Symbol: dksA
• ID: 6989245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2821552
• End bp: 2822022
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380881
• Product: DnaK suppressor protein
• Protein accession: YP_002263949
• Protein GI: 209696019
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.422006
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTAG GAGAAGCTGT AATGCCACAG AGCAATACAA AAAAGACGCT AGGTATTCTA 
GCTATTGCAG GTGTAGAACC TTACCAGCCT AAAGCTGGTG AAGAGTACAT GGGCCCAGCA 
CAAGTAGAAC ATTTTACTAA AATTCTAGAC GCTTGGCGTA ATCAACTAAG GGAAGAAGTT 
GAACGCACAG TTAATCATAT GAAAGATGAG GCAGCGAATT TCCCGGATCC AGTAGATCGC 
GCCGCTCAAG AAGAAGAATT TAGTTTAGAG CTACGTAATC GCGATCGCGA GCGTCGCCTG 
ATTAAAAAAA TTGAAAAAAC ACTAAGCAAA ATCGAAGAAG AAGAATTCGG ATTCTGTGAT 
TCTTGTGGTG TTGAAATTGG TATTCGTCGC TTAGAAGCAC GTCCAACTGC TGACCTTTGT 
ATTGACTGTA AAACACTTGC AGAAATCAAA GAAAAGCAAA TGGCAGGTTA A 

 

Protein sequence

MFLGEAVMPQ SNTKKTLGIL AIAGVEPYQP KAGEEYMGPA QVEHFTKILD AWRNQLREEV 
ERTVNHMKDE AANFPDPVDR AAQEEEFSLE LRNRDRERRL IKKIEKTLSK IEEEEFGFCD 
SCGVEIGIRR LEARPTADLC IDCKTLAEIK EKQMAG