Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2602 |
Symbol | mrcB |
ID | 6988179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2815769 |
End bp | 2818144 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380878 |
Product | penicillin-binding protein transpeptidase |
Protein accession | YP_002263946 |
Protein GI | 209696016 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.809187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAA AAAAGAAAAC ACCAGTAAAG GCTGCACCAA AAAAGCCGGT AGCAAAAAAG AAAACGCGAA CAAAGCGTAA AGCGACGGCA AAAAAGAAAA TACAGAATAA AAATTCGTTT TGGAAAGCTC TATTTATTCT TGGTTTGAAG TTAGGGTTAG TCGTACTCGC TGTTTTAGTT ATCGCGGGTA TTTATTTAGA TACTGTGGTT AAAAATCGAT TTGATGGTCA ATTATTTAAA TTGCCTACGG TTGTTTATAG TCGAGTATTG TCGTTATCTC CTGGGCAAAA TATTAGTTTA AAATCCGTTA AAAGTGAATT GGATTTTTTA AAATACCAAA AAGTAGGACA ACCACAGCGA TCTGGTGAAT ATTCATCATC ATCAACAAAA ATTGAATTGA TCCGTCGACC TTTTGAATTC CAACAAGGTC CAGAACCGGA TCGTCATGTC ATGTTGTATT TCAATTCTAA TGGTTTACAA AAAATAGTTA ATTTGAGTGC GAAAAAGCAA ATGGGCTTTT TACAAATAGA GCCTCAATTT TTAGGTATGC TAGATGCGGA TGATGACCAA CAACGTTTGT TTTTACGTAG AGAGCAATTT CCAGAAGTTA TGGTCGATGC GTTATTGGCA ACAGAAGATC GTGATTTTTA TCAACATGAT GGCGTTTCGC CTTTAGCCAT TGCAAGGGCG ATGGTGGTAA ATATTAAAGC AGGTAGAACA GTACAAGGCG GAAGTACCTT GACTCAACAA CTTGCTAAAA ACTTATTTTT ATCAAGTGAG CGAACATTGT GGCGAAAAGT GAGAGAAGCC TACATCGCAC TTATCTTGGA TTATCGTTAC AGTAAAGACC GTATACTAGA AGCGTATTTA AATGAGGTTT ATTTAGGGCA AACAGGAGGC GAAGCGGTTC ATGGCTTTGG TTTGGCTGCT CAAGTTTATT TTGGACGTCC AATTGAAGAG TTAAGAATTG ATCAACTTGC TATGCTTGTT GGTATGGTGA AAGGACCTTC TTATTATAAT CCGATGCGCT TCCCTGAAAG AGTAAAAGAG CGTCGAGATT TGGTATTACG TTTGATGATG CAAGAAGAGA TCTTATCACC TCGTCAATAT GAAATGGCAG CGACTCGTCC TTTGGATGTA AAAAAGAGAG CGACGATATC TACCCGCCAA CCTGCGTACT TTCAGCAACT GAAATGGGAA TTGAAAGAAA AAGCAGGGGA GGCGTATCAA AAAGGCGAAG GACTACGAGT CTTTACTACA CTTGACCCAT TATCACAGCA AAAAGCAGAA CAAGCGGTAG AACGAACGGT TCCTCAGCTA GAGAAGCGAG CAGGTAAGGG ATTAGAGGCT GCAATGGTTG TGGTGGATCG TCAAAGTGGT GAAATTAGAG CGATGATTGG TGGTAGTCGA ACGGGATTTG ATGGATTTAA TCGAGCGATT AATGCGAAGC GTCCTATTGG TTCGTTAGTA AAACCGGCTA TTTATTTATC TGCCTTAGAA AGTCCTGAGA AGTTTTCATT GGCGAGTACG CTAGATGACA AACCGATCGA ATTAAAAGGA AGCAAAGGAA CTACGTGGAC TCCGAGAAAT TTTGATCGCA AATTCAGAGG GGAAGTCCCT CTTTATTATG CATTTTCGCG TTCGTTAAAT GTGCCAACGG TCAACCTTGG CTTAATGGTT GGTTTAAATA AAGTAACAGA TACCTTGGTC AAGCTTGGTA TTGAAGCGAG TGAAATTAAT CAGGTTCCTT CAATGTTATT GGGATCATTA AATTTATCTC CTTATCAAGT GGCTCAAATG TATCAAACAT TAGGCAACGG TGGGCGAAAG TCACCTTTAA CGGCACTTAA AGCCGTTGTG AATAGTGATG GAGAGTTACT TTATGAAAAC TTCCCTCGAT CTTCTCTGGT TGTCTCTGAA CAAGCGGTTT GGTTAACTAT TTATGGGATG AAGAAAGTCG TTAGTGAAGG AACGGCAAGA TTTTTAAACA GTAAATACAA TTGGGCCACT CTAGCGGGTA AAACAGGTAC CAGTAATGAC TCTAGAGACA GCTGGTATGC AGGGGTTGAT GGAAGAGAAG TCGCGATCAC ATGGCTTGGA AGAGATGACA ATAAGCCGAT GAAGTTGACT GGTTCTAGTG GGGCATTAAG GGTGTACGCA GATTATCTTA GCTTAAGAAC GCCAGAAGCT TATCAATTAC CTTGGCCTAA AGAAGTGACA ACGGCCAGAT TTGACTTAGA AAGTAATAAA ACATTAGAGC CGGATTGTTC TGGAAGCGTT AAGTTACCTA TCTGGGATAA GAGTGGACAA TATAAAGTTG AATGTGAGAA GAAAAACAGT CCTGCTAGAT GGTTAACTGA TATTTTTGGG TTGTAA
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Protein sequence | MVEKKKTPVK AAPKKPVAKK KTRTKRKATA KKKIQNKNSF WKALFILGLK LGLVVLAVLV IAGIYLDTVV KNRFDGQLFK LPTVVYSRVL SLSPGQNISL KSVKSELDFL KYQKVGQPQR SGEYSSSSTK IELIRRPFEF QQGPEPDRHV MLYFNSNGLQ KIVNLSAKKQ MGFLQIEPQF LGMLDADDDQ QRLFLRREQF PEVMVDALLA TEDRDFYQHD GVSPLAIARA MVVNIKAGRT VQGGSTLTQQ LAKNLFLSSE RTLWRKVREA YIALILDYRY SKDRILEAYL NEVYLGQTGG EAVHGFGLAA QVYFGRPIEE LRIDQLAMLV GMVKGPSYYN PMRFPERVKE RRDLVLRLMM QEEILSPRQY EMAATRPLDV KKRATISTRQ PAYFQQLKWE LKEKAGEAYQ KGEGLRVFTT LDPLSQQKAE QAVERTVPQL EKRAGKGLEA AMVVVDRQSG EIRAMIGGSR TGFDGFNRAI NAKRPIGSLV KPAIYLSALE SPEKFSLAST LDDKPIELKG SKGTTWTPRN FDRKFRGEVP LYYAFSRSLN VPTVNLGLMV GLNKVTDTLV KLGIEASEIN QVPSMLLGSL NLSPYQVAQM YQTLGNGGRK SPLTALKAVV NSDGELLYEN FPRSSLVVSE QAVWLTIYGM KKVVSEGTAR FLNSKYNWAT LAGKTGTSND SRDSWYAGVD GREVAITWLG RDDNKPMKLT GSSGALRVYA DYLSLRTPEA YQLPWPKEVT TARFDLESNK TLEPDCSGSV KLPIWDKSGQ YKVECEKKNS PARWLTDIFG L
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