Gene VSAL_I2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2602 
SymbolmrcB 
ID6988179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2815769 
End bp2818144 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content40% 
IMG OID643380878 
Productpenicillin-binding protein transpeptidase 
Protein accessionYP_002263946 
Protein GI209696016 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.809187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAA AAAAGAAAAC ACCAGTAAAG GCTGCACCAA AAAAGCCGGT AGCAAAAAAG 
AAAACGCGAA CAAAGCGTAA AGCGACGGCA AAAAAGAAAA TACAGAATAA AAATTCGTTT
TGGAAAGCTC TATTTATTCT TGGTTTGAAG TTAGGGTTAG TCGTACTCGC TGTTTTAGTT
ATCGCGGGTA TTTATTTAGA TACTGTGGTT AAAAATCGAT TTGATGGTCA ATTATTTAAA
TTGCCTACGG TTGTTTATAG TCGAGTATTG TCGTTATCTC CTGGGCAAAA TATTAGTTTA
AAATCCGTTA AAAGTGAATT GGATTTTTTA AAATACCAAA AAGTAGGACA ACCACAGCGA
TCTGGTGAAT ATTCATCATC ATCAACAAAA ATTGAATTGA TCCGTCGACC TTTTGAATTC
CAACAAGGTC CAGAACCGGA TCGTCATGTC ATGTTGTATT TCAATTCTAA TGGTTTACAA
AAAATAGTTA ATTTGAGTGC GAAAAAGCAA ATGGGCTTTT TACAAATAGA GCCTCAATTT
TTAGGTATGC TAGATGCGGA TGATGACCAA CAACGTTTGT TTTTACGTAG AGAGCAATTT
CCAGAAGTTA TGGTCGATGC GTTATTGGCA ACAGAAGATC GTGATTTTTA TCAACATGAT
GGCGTTTCGC CTTTAGCCAT TGCAAGGGCG ATGGTGGTAA ATATTAAAGC AGGTAGAACA
GTACAAGGCG GAAGTACCTT GACTCAACAA CTTGCTAAAA ACTTATTTTT ATCAAGTGAG
CGAACATTGT GGCGAAAAGT GAGAGAAGCC TACATCGCAC TTATCTTGGA TTATCGTTAC
AGTAAAGACC GTATACTAGA AGCGTATTTA AATGAGGTTT ATTTAGGGCA AACAGGAGGC
GAAGCGGTTC ATGGCTTTGG TTTGGCTGCT CAAGTTTATT TTGGACGTCC AATTGAAGAG
TTAAGAATTG ATCAACTTGC TATGCTTGTT GGTATGGTGA AAGGACCTTC TTATTATAAT
CCGATGCGCT TCCCTGAAAG AGTAAAAGAG CGTCGAGATT TGGTATTACG TTTGATGATG
CAAGAAGAGA TCTTATCACC TCGTCAATAT GAAATGGCAG CGACTCGTCC TTTGGATGTA
AAAAAGAGAG CGACGATATC TACCCGCCAA CCTGCGTACT TTCAGCAACT GAAATGGGAA
TTGAAAGAAA AAGCAGGGGA GGCGTATCAA AAAGGCGAAG GACTACGAGT CTTTACTACA
CTTGACCCAT TATCACAGCA AAAAGCAGAA CAAGCGGTAG AACGAACGGT TCCTCAGCTA
GAGAAGCGAG CAGGTAAGGG ATTAGAGGCT GCAATGGTTG TGGTGGATCG TCAAAGTGGT
GAAATTAGAG CGATGATTGG TGGTAGTCGA ACGGGATTTG ATGGATTTAA TCGAGCGATT
AATGCGAAGC GTCCTATTGG TTCGTTAGTA AAACCGGCTA TTTATTTATC TGCCTTAGAA
AGTCCTGAGA AGTTTTCATT GGCGAGTACG CTAGATGACA AACCGATCGA ATTAAAAGGA
AGCAAAGGAA CTACGTGGAC TCCGAGAAAT TTTGATCGCA AATTCAGAGG GGAAGTCCCT
CTTTATTATG CATTTTCGCG TTCGTTAAAT GTGCCAACGG TCAACCTTGG CTTAATGGTT
GGTTTAAATA AAGTAACAGA TACCTTGGTC AAGCTTGGTA TTGAAGCGAG TGAAATTAAT
CAGGTTCCTT CAATGTTATT GGGATCATTA AATTTATCTC CTTATCAAGT GGCTCAAATG
TATCAAACAT TAGGCAACGG TGGGCGAAAG TCACCTTTAA CGGCACTTAA AGCCGTTGTG
AATAGTGATG GAGAGTTACT TTATGAAAAC TTCCCTCGAT CTTCTCTGGT TGTCTCTGAA
CAAGCGGTTT GGTTAACTAT TTATGGGATG AAGAAAGTCG TTAGTGAAGG AACGGCAAGA
TTTTTAAACA GTAAATACAA TTGGGCCACT CTAGCGGGTA AAACAGGTAC CAGTAATGAC
TCTAGAGACA GCTGGTATGC AGGGGTTGAT GGAAGAGAAG TCGCGATCAC ATGGCTTGGA
AGAGATGACA ATAAGCCGAT GAAGTTGACT GGTTCTAGTG GGGCATTAAG GGTGTACGCA
GATTATCTTA GCTTAAGAAC GCCAGAAGCT TATCAATTAC CTTGGCCTAA AGAAGTGACA
ACGGCCAGAT TTGACTTAGA AAGTAATAAA ACATTAGAGC CGGATTGTTC TGGAAGCGTT
AAGTTACCTA TCTGGGATAA GAGTGGACAA TATAAAGTTG AATGTGAGAA GAAAAACAGT
CCTGCTAGAT GGTTAACTGA TATTTTTGGG TTGTAA
 
Protein sequence
MVEKKKTPVK AAPKKPVAKK KTRTKRKATA KKKIQNKNSF WKALFILGLK LGLVVLAVLV 
IAGIYLDTVV KNRFDGQLFK LPTVVYSRVL SLSPGQNISL KSVKSELDFL KYQKVGQPQR
SGEYSSSSTK IELIRRPFEF QQGPEPDRHV MLYFNSNGLQ KIVNLSAKKQ MGFLQIEPQF
LGMLDADDDQ QRLFLRREQF PEVMVDALLA TEDRDFYQHD GVSPLAIARA MVVNIKAGRT
VQGGSTLTQQ LAKNLFLSSE RTLWRKVREA YIALILDYRY SKDRILEAYL NEVYLGQTGG
EAVHGFGLAA QVYFGRPIEE LRIDQLAMLV GMVKGPSYYN PMRFPERVKE RRDLVLRLMM
QEEILSPRQY EMAATRPLDV KKRATISTRQ PAYFQQLKWE LKEKAGEAYQ KGEGLRVFTT
LDPLSQQKAE QAVERTVPQL EKRAGKGLEA AMVVVDRQSG EIRAMIGGSR TGFDGFNRAI
NAKRPIGSLV KPAIYLSALE SPEKFSLAST LDDKPIELKG SKGTTWTPRN FDRKFRGEVP
LYYAFSRSLN VPTVNLGLMV GLNKVTDTLV KLGIEASEIN QVPSMLLGSL NLSPYQVAQM
YQTLGNGGRK SPLTALKAVV NSDGELLYEN FPRSSLVVSE QAVWLTIYGM KKVVSEGTAR
FLNSKYNWAT LAGKTGTSND SRDSWYAGVD GREVAITWLG RDDNKPMKLT GSSGALRVYA
DYLSLRTPEA YQLPWPKEVT TARFDLESNK TLEPDCSGSV KLPIWDKSGQ YKVECEKKNS
PARWLTDIFG L