Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2568 |
Symbol | |
ID | 6987821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2760222 |
End bp | 2761532 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380837 |
Product | putative membrane associated peptidase |
Protein accession | YP_002263915 |
Protein GI | 209695985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0102631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAT CTAAATTAAC TCGTATTCCC GTGATTCATC GCATTCTTAT CGGTCTCTGC AGTGCAGGAG TCGTTGCAGC GATTGCAACT ATTCCAGGCT CTGTGGCTCC TGATTCTGGC TTTTATAAAT TAAACGTTGG TCAAACTTAC CCCACAGAAA TCCGTCAAGA AGCCCTGATC TCTCATGAAC AATCAGGTAA AAACCAACAA CTGATTTGGG AAACTTACAC AGTAAAATCA GGTGAAAGTG CCTCTGTATT ATTCAACCGA GTCGGATTAA GCGCCCGTCA ATTATATAAT CTAACCAGTA GCGACAAAGA AATAGAAACA CAACTGACTC GCTTACGACC TGGTGATAAA CTTAAATTTG GTTTTAATCA AAATCAAGAA ATCATCCAAC TGATCCGTCC AATAAGTCAA TTTGAAACCT ACCGTATTAG TAAAGTAGGC GATGGTTACT TAGGGTTACT TGAAAAACAA GAAATTGAAA CTCAACTGAA TTATACCAAA GCAACGATTA CTTCCAATTT CTGGAATGCT TCTATTACTG CAGGGTTAAA CCCGAATCAG ATAATGGAAC TAGCGGGGAT TTTTGGTTGG GATATTGATT TTGCATTAGA TATTCGTGCT GGTGATACCT TCACTGTACT TTATGAAGAG AAGTACAGTA AAGGTGAATA TGCAGGTAAA GGAAATATTA TAGCGACCAC TTTCACTAAC CGTGGCGACA CGTTTACCGC AATTCGTAAT GATAAAAATG GAAATTTTTA CGAACCTAAT GGTCGAGCGA TGAAAAAAGC ATTTTTACGC TCTCCAATTA ATTTTCGTTA TGTTAGTTCT AATTTTAATC CACGTCGTCT TCATCCAGTA ACAGGACAAA GAACCGCACA TCGAGGGACT GATTATGTTG CCCCTGTAGG AACGCCTATT TGGGCTGCCG GTGATGGTGT CGTAGATAAA TCAGGATATA ACCAGTTTAA TGGTAACTAT GTATTCATTC GTCATAGTAA TACTTACATT ACAAAATATT TACACATGAC TAAACGCTAT GTAAAAGCAG GACAGCGAGT AAAACAAGGT GATACCGTAG GTACGCTTGG TGGAACTGGC CGAGTGACCG GCCCTCACTT ACACTATGAA TTTTTAGTCA ATGGCGTTCA TAAAGACTCA AGAACCGTTT CTTTACCCCA ATCTAAATCG CTAACAGGTA AAGATAAAAA AGAGTTTGAA GTTGTCGCAA AACAGCGATT AAAAGAGTTA AACCAATACA GTCAATTTAT TGTAGGTACT CATCCGGTAC TCACTCACTA A
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Protein sequence | MILSKLTRIP VIHRILIGLC SAGVVAAIAT IPGSVAPDSG FYKLNVGQTY PTEIRQEALI SHEQSGKNQQ LIWETYTVKS GESASVLFNR VGLSARQLYN LTSSDKEIET QLTRLRPGDK LKFGFNQNQE IIQLIRPISQ FETYRISKVG DGYLGLLEKQ EIETQLNYTK ATITSNFWNA SITAGLNPNQ IMELAGIFGW DIDFALDIRA GDTFTVLYEE KYSKGEYAGK GNIIATTFTN RGDTFTAIRN DKNGNFYEPN GRAMKKAFLR SPINFRYVSS NFNPRRLHPV TGQRTAHRGT DYVAPVGTPI WAAGDGVVDK SGYNQFNGNY VFIRHSNTYI TKYLHMTKRY VKAGQRVKQG DTVGTLGGTG RVTGPHLHYE FLVNGVHKDS RTVSLPQSKS LTGKDKKEFE VVAKQRLKEL NQYSQFIVGT HPVLTH
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