| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2563 |
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| Symbol | gltD |
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| ID | 6988606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2749866 |
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| End bp | 2751338 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380828 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_002263910 |
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| Protein GI | 209695980 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGC CTACAGGTTT TTTAGAAAAT GGTCGTGAGT TACCAAAAAA ATTAGAACCA
ATTGTTCGAA TTCAAGATAA TAAAGAATTT GTCTTAAACG AAGAATTTGG CGATAAAATC
AATACGCAAG CATCTCGCTG TATGGATTGT GGTGTTCCGT TTTGTCATAA CGGATGCCCT
ATTGGGAACA TCATTCCGGA ATTTAACGAT GCCGTATATC GCGATAGCTG GGAAGAAGCT
TGGCATATTC TAAGCTCAAC AAATAACTTT CCTGAATTTA CAGGCCGTGT ATGCCCTGCT
CCTTGTGAAA GTGCATGTGT ATTAGGGATC AATCAAGATC CAATCACAAT CTGTAATATT
GAAAAAACAA TCGTTGAGAC TGCGTATCGT GAAGGATACG CACAACCTAA AAAGCCTCGT
TCCCGTACAG GAAAAACTGT CGCGATTATT GGTTCAGGTC CTGCCGGCTT AGCTGCTGCA
GAGCAAATCA ATAGTGCAGG CCATTCAGTC ACTGTTTTTG AACGAGATGA GAAAGTTGGT
GGCTTATTAC GTTTCGGTAT TCCTGATTTC AAACTAGGAA TGGATATCAT TGATCGAAAG
ATCAATTTAA TGGCCGAAGC CGGTATTAAG TTTGAAGTAA ATGCACATAT TGGCGTTTCA
ATTAATGCTC AACAACTGCG CCAAGATTTT GATGTTGTAT TACTGACTGG TGGTTCAACA
GTACCAAGGG ATCTTCCTAT TCCTGGTCGT GAATTAAATG GGGTTCATTT TGCAATGGAA
TTCCTAGGTC AAAACAATCG CCGAGCGAAC AATATGGATC TTAAAACAAA AGAGATCCAT
GCAAAAGATA AACATGTTGT CGTTATCGGT GGTGGCGATA CAGGATCAGA TTGCGTAGGT
ACTTCTAACC GTCATGGTGC AGCAAGCATT ACTCAAGTTG AGATAATGCC TATTCCACCA
GAAAAGCGCC CAGCGAATAT GCCTTGGCCT CAATACCCAA TGATCATGAA AACAACGACT
TCCCACGAAG AAGGCTGTGA GCGTCATTGG AACATTTTAA CTAAAGAGTT TATCTCTGAT
GATGAGGGTA ATGTCACCGG CCTCCGTATT GCTGATATCG TTTGGCAAGA TGCCAAACCT
GGAGAGCGAC CTGGTTTTAA CGAAGTAGCA AATAGTGAGC GAGTTATACC ATGTGATCAA
GCTTTCTTAG CTATGGGATT TTTACACCCA GAACCTACGG GTGTTCTAGC TCAATTAGAT
ATTAAACTTG ATGATCGTGG CAACGTTGCT ACCAATGGTT TTTCTACTAA CCAAAAAGGT
GTTTTTGCTG CAGGTGATAT GCGTACAGGG CAATCATTAA TTGTACGTTG TATTAATGAA
GGTCGTGAAT GTGCGCGTGA AGTTGACGCT TATCTTATGG GGAATACAAA CTTAGAAGCG
AAAGCAGGCT CTCTAATGCT ATCAGCATCA TAA
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| Protein sequence | MGKPTGFLEN GRELPKKLEP IVRIQDNKEF VLNEEFGDKI NTQASRCMDC GVPFCHNGCP
IGNIIPEFND AVYRDSWEEA WHILSSTNNF PEFTGRVCPA PCESACVLGI NQDPITICNI
EKTIVETAYR EGYAQPKKPR SRTGKTVAII GSGPAGLAAA EQINSAGHSV TVFERDEKVG
GLLRFGIPDF KLGMDIIDRK INLMAEAGIK FEVNAHIGVS INAQQLRQDF DVVLLTGGST
VPRDLPIPGR ELNGVHFAME FLGQNNRRAN NMDLKTKEIH AKDKHVVVIG GGDTGSDCVG
TSNRHGAASI TQVEIMPIPP EKRPANMPWP QYPMIMKTTT SHEEGCERHW NILTKEFISD
DEGNVTGLRI ADIVWQDAKP GERPGFNEVA NSERVIPCDQ AFLAMGFLHP EPTGVLAQLD
IKLDDRGNVA TNGFSTNQKG VFAAGDMRTG QSLIVRCINE GRECAREVDA YLMGNTNLEA
KAGSLMLSAS
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