| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2556 |
|---|
| Symbol | thrA |
|---|
| ID | 6989293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2736372 |
|---|
| End bp | 2738831 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643380821 |
|---|
| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
|---|
| Protein accession | YP_002263904 |
|---|
| Protein GI | 209695974 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTAT TAAAGTTTGG TGGTTCGTCA TTAGCAGATT CAGATCGTTT TTTACGTGCC
GCAGATATCA TTGCCAATAA TGCGCAACAG CAAGATGTTT CTGTTGTTTT ATCGGCACCG
GGTAAGGTAA CGAATAAGTT AGTTTCAGTC GTTGATAACG TATTAACGAA TGGAGAAGCT
GAGTTACAAA TTTCAGAATT AGAAGCTGTT TTTATTCAGT TGTTTGATGG TATTTCTACC
GCACTTCCAC AAGTCGATCT TAAAACGCTT GAAAATAAGC TAAAAGATTC ACTTTCTCAA
CTTCGCCAAT ATGTGCATGG TATTAGTTTA TTAGGTATGT GCCCTGATAA TGTCTATGCA
AAAATCATCA GTAAAGGCGA ACGTATTTCA GTCGTTACAA TGAAGGCGGT ACTTGAAGCT
AAAGGGCAAC AAGCAAGCCT TATCGACCCA GTTAAATATC TTTATGCTCG TGGTAGTTTT
TTAGAAGGTG CTGTTGATGT TGATATTTCG ACGCTGAATT TTAAAAATGA ACCTCTTCCT
AAAGGGCACG TAAATATCAT GCCTGGTTTT ACTGCAGGGA ATGAAAAAGG TGAATTGCTT
ACTTTAGGGC GTAACGGATC TGATTATTCA GCGGCGGTGC TTGCCGCTTG TCTTCGTGCC
GAGTGTTGTG AGATTTGGAC TGATGTTGAT GGTGTTTATA ACTGTGACCC TCGATTAGTT
GATGATGCTC GTCTACTTAA GTCTTTAAGC TATCAAGAAG CAATGGAATT GTCGTATTTT
GGGGCTTCAG TTTTGCATCC TAAAACCATC GCACCTATTG CTCAATTTCA TATTCCTTGC
CTAATTAAAA ACAGTTTTAA CCCTCAAGGT CCAGGCACGC TTATTGGCCA AGATACAGGT
GAAGATAATT TAGCCATTAA AGGGATAACG ACATTAAGTA ATTTAACGAT GGTTAACGTC
AGTGGCCCTG GCATGAAAGG CATGGTTGGT ATGGCAAGCC GTGTATTTGG TGCAATGTCT
ACGGCTGGTA TTTCTATTGT CTTAATTACT CAGTCTTCTT CTGAGTACAG TATCAGCTTT
TGTATTGAGG CTGAGGATAA AGTACAAGCA GAGCAAGTAT TACGCGAAGC GTTTGAATTA
GAATTAAAAG ACGGTTTATT AGAACCCGTT GAATTTATTA ATGATGTTGC TATCGTAACG
CTAGTTGGTG ATGGCATGAG AACATCAAAA GGTGTGGCTT CTCAATTCTT TACATCATTA
ACAGAAGTGA ACGTTAATAT CATTGCTATT GCTCAAGGCT CTTCTGAGCG AGCTATTTCA
GCCGTCATTC CTGAAGATAA AGTGTCTGAA TCAATTAAAG CGTGTCACGA GAATCTCTTC
AATAGTAAGC ATTTCTTAGA TGTTTTTGTC GTAGGTGTTG GTGGTGTTGG TGGTGAGTTA
GTTGAACAAA TTAAACGACA ACAACCAAAG CTGTCTCAAA AAGGCATCGA AATTCGAGTT
TGTGGCTTGG CAAATAGTCG AGGTCTATTA TTGGACAGCA AAGGGATTTC ACTGGACGGA
TGGCGTGACC GAATGGGTAA TGCGACCGAA GAGTTTAGTC TTGCTCGTTT AATCTCATTG
GTTCAGCGTA ACCATATTAT TAACCCTGTG ATTATTGATT GTACGTCTGA TCATGGTATT
GCTGCTCAAT ATGTTGATTT TCTATCGGCA GGTTTTCACG TTATTACTCC GAATAAAAAA
TCGAACACCG ATTCTATGGC CTATTACCAT CAGTTACGTA ATGCAGCACG TGCAACGCGA
CGTAAGTTTA TGTATGAGAC GACGGTTGGT GCAGGTTTAC CTGTTATTGA AAACCTACAA
AACCTAATTG CTGCTGGTGA TGAGCTTGTA AAGTTTAATG GTATTTTATC CGGTTCTATG
TCTTATATTT TTGGCAAGCT AGACGAAGGC ATGTCATTAA GTGACGCTAC GAATGTAGCG
AAAAAAAATG GCTTTACTGA GCCCGATCCT CGAGATGATT TATCTGGTAT GGATGTGGCT
CGAAAACTTC TTATTCTTGC TCGCGAATCT GGCCTTGAAA TTGAATTAGA TGACGTAGAG
GTTGAACAAG CATTACCACC AGGCTTTGAT GACTCAGGAA CTATTGATGA ATTCATGGCT
CGTCTTCCAG AAGCGGATGC ATATTTTGTT CAAGAGTCAG CTAAAGCCGC AGAGGAAGGC
AAAGTATTAC GTTATGTCGG TGAAATTTCA GAAGGGAAAT GTAAGGTTCG AATTGCTGCC
GTAGATGGTG ATGATCCTAT GTTTAAGATT AAAGACGGTG AAAATGCATT GGCATTCTAC
AGTCGTTACT ATCAACCAAT CCCATTGGTA TTAAGAGGCT ATGGCGCAGG AACAGAAGTA
ACTGCTGCTG GCGTATTCTC TGATCTTATG CGCACCCTTG GCTGGAAATT AGGAGTATAA
|
|---|
| Protein sequence | MRVLKFGGSS LADSDRFLRA ADIIANNAQQ QDVSVVLSAP GKVTNKLVSV VDNVLTNGEA
ELQISELEAV FIQLFDGIST ALPQVDLKTL ENKLKDSLSQ LRQYVHGISL LGMCPDNVYA
KIISKGERIS VVTMKAVLEA KGQQASLIDP VKYLYARGSF LEGAVDVDIS TLNFKNEPLP
KGHVNIMPGF TAGNEKGELL TLGRNGSDYS AAVLAACLRA ECCEIWTDVD GVYNCDPRLV
DDARLLKSLS YQEAMELSYF GASVLHPKTI APIAQFHIPC LIKNSFNPQG PGTLIGQDTG
EDNLAIKGIT TLSNLTMVNV SGPGMKGMVG MASRVFGAMS TAGISIVLIT QSSSEYSISF
CIEAEDKVQA EQVLREAFEL ELKDGLLEPV EFINDVAIVT LVGDGMRTSK GVASQFFTSL
TEVNVNIIAI AQGSSERAIS AVIPEDKVSE SIKACHENLF NSKHFLDVFV VGVGGVGGEL
VEQIKRQQPK LSQKGIEIRV CGLANSRGLL LDSKGISLDG WRDRMGNATE EFSLARLISL
VQRNHIINPV IIDCTSDHGI AAQYVDFLSA GFHVITPNKK SNTDSMAYYH QLRNAARATR
RKFMYETTVG AGLPVIENLQ NLIAAGDELV KFNGILSGSM SYIFGKLDEG MSLSDATNVA
KKNGFTEPDP RDDLSGMDVA RKLLILARES GLEIELDDVE VEQALPPGFD DSGTIDEFMA
RLPEADAYFV QESAKAAEEG KVLRYVGEIS EGKCKVRIAA VDGDDPMFKI KDGENALAFY
SRYYQPIPLV LRGYGAGTEV TAAGVFSDLM RTLGWKLGV
|
|---|
| |