Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2548 |
Symbol | |
ID | 6987811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2728705 |
End bp | 2730138 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380813 |
Product | putative amino-acid transporter |
Protein accession | YP_002263896 |
Protein GI | 209695966 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAGTA TTATTAACTT ACTGAATGAC CTGTTATGGG GTTCAGTTCT CGTGTATTTA TTAGTCGCCA TTGGGATCTA TTTTACGGTT CGTTTAGGCT TTATTCAATT TCGTCATTTT GGGCATATGT TTTCTGTTTT AAAAAACAGC CGTAAATCTG ATTCTTCTGG TATTTCATCG TTTCAAGCAC TATGCACCAG CTTAGCTGCG CGTGTTGGTA CGGGGAATAT GGCAGGGGTT GCCGTCGCTT TAACCGCCGG CGGTCCAGGC GCTATTTTCT GGATGTGGCT TATTGCTATG TTGGGTATGG CAACGTCATT TGCTGAAAGT ACATTAGCAC AATTATATAA AACCAAAGAT GATGAAGGCA ACTATCGTGG TGGCCCTGCT TATTATATGG AAAAAGGATT GGGCATGCGC TGGATGGGCG TATTGTTTTC TGTCTTTTTG ATCATCGCTT TTGGTTTGGT ATTTAATGCA GTACAAGCAA ACTCGATAGC CAGTGCAATG CAGAATGCAT TCGGGTGGCA ACCTCTGTAT GTCGGTATTG GTATTGTGAT TATTTCTGCG ATTGTTATTT TCGGTGGTTT TCGAACCATT GCTCGAACGG CTGAAATCAT AGTACCTGTG ATGGCATTAG CGTACTTAGC GATTGCTTTA TATATCATGG TTACAAACAT AGAAAAACTA CCGGGAGTGG TTACTCTGAT CTTTAAGAGT GCTTTTGGAC TTCAAGAAGC CGCTGCTGGT GGTTTAGGTT ACGCAATTGC TCAAGCAATG ATTAATGGTA TTAAGCGCGG TCTATTCTCA AATGAAGCAG GTATGGGGTC TGCACCTAAT GCAGCAGCCT CTGCAACACC TTATCCGCCG CATCCTGCTT CACAAGGTTA TGTTCAAATG CTTGGTGTGT TTATGGATAC GATTGTTATC TGTTCATCTA CTGTCGCGAT TATCTTAATG TCGGGTGAAT ATGTACCGCA TGGCGAAGTC ACTGGTATTG AGTTAACTCA GTTAGCATTA ACAAGCCAAG TGGGGGATTG GGGCGGAATA TTTATTGCGG TTGCTATTTT CTTCTTTGCT TTTACCTCTA TCATTGCAAA TTATTCGTAC GCTGAGACTA ATTTGATTTT CTTGGAGCAC AATCATAAAG CCGGGATCGG TATTTTCCGT ATCGTGGTTT TAGGTATGGT TATGTTTGGG GCGTTATCAT CATTACCTAC GGTATGGGCT TTAGCTGATG TTTCTATGGG GATGATGGCA ATAGTGAATT TAATCGCAAT TTCATTATTG TCAGGAACCG TTATCAAGCT GGCGAAAGAT TACAATAAGC AGCTTAGTGA GGGTAAATTA CCGACCTTTG ATAGTAAAGA TTACCCTGAA TTACATTCTC AATTAGAAGA AGGTATTTGG GATAATAACA AAGAGAAAAA CTAA
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Protein sequence | MTSIINLLND LLWGSVLVYL LVAIGIYFTV RLGFIQFRHF GHMFSVLKNS RKSDSSGISS FQALCTSLAA RVGTGNMAGV AVALTAGGPG AIFWMWLIAM LGMATSFAES TLAQLYKTKD DEGNYRGGPA YYMEKGLGMR WMGVLFSVFL IIAFGLVFNA VQANSIASAM QNAFGWQPLY VGIGIVIISA IVIFGGFRTI ARTAEIIVPV MALAYLAIAL YIMVTNIEKL PGVVTLIFKS AFGLQEAAAG GLGYAIAQAM INGIKRGLFS NEAGMGSAPN AAASATPYPP HPASQGYVQM LGVFMDTIVI CSSTVAIILM SGEYVPHGEV TGIELTQLAL TSQVGDWGGI FIAVAIFFFA FTSIIANYSY AETNLIFLEH NHKAGIGIFR IVVLGMVMFG ALSSLPTVWA LADVSMGMMA IVNLIAISLL SGTVIKLAKD YNKQLSEGKL PTFDSKDYPE LHSQLEEGIW DNNKEKN
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