| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2527 |
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| Symbol | lepA |
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| ID | 6988742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2709013 |
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| End bp | 2710806 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380791 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_002263875 |
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| Protein GI | 209695945 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0160196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA TTCGTAATTT TTCTATTATT GCCCATATCG ATCACGGTAA ATCAACACTA
TCTGACCGCC TTATCCAAGT TTGTGGTGGC CTGTCAGACC GTGAAATGGC AGCACAAGTT
CTTGATTCAA TGGATCTAGA ACGTGAACGT GGTATCACTA TTAAAGCCCA GAGTGTAACT
CTAAACTACA CGGCGAACGA TGGTGAAACT TATCAACTAA ACTTTATCGA TACACCTGGA
CACGTTGATT TCTCATACGA AGTATCACGT TCACTTGCGG CTTGTGAAGG CGCATTATTA
GTGGTTGATG CAGGTCAGGG TGTAGAAGCT CAAACTCTAG CAAACTGTTA TACCGCTCTT
GAAATGGATT TAGAAGTCGT TCCAATCTTG AATAAGATTG ACTTACCAGC GGCTGATCCT
GATCGTGTAG CAGAAGAAAT TGAAGACATC GTTGGTATTG AAGCGATGGA AGCGACACGT
TGTTCAGCAA AGACTGGGTT AGGTGTTGAT GCCGTTCTTG AAACGATTGT TAAATGCATT
CCAGCACCGG AAGGCAATCC AGAAGGTCCA ACCCAAGCGT TGATCATTGA CTCATGGTTT
GATAATTACT TAGGTGTTGT TTCTTTAGTT CGAGTTAAAC ATGGCTCATT GAAGAAAAAT
GACAAAATTA AAGTAATGAG CACTGGCCAA GCATGGAATG TTGACCGCAT TGGTATCTTC
ACTCCAAAAC AAGTGGATAC TGATGGATTA AACACAGGTG AAGTAGGCTG GGTTGTTTGT
GGTATTAAAG ATATTTTAGG CGCACCAGTG GGTGATACAT TAACTCACGC TAAAGGTGGC
TGTGAAGAGC GCTTACCTGG TTTCCAAAAA GTAAAACCAC AGGTATATGC TGGTTTATTC
CCTATATCAT CGGATGATTA TGAAAACTTC CGTGATGCAT TGGGTAAATT AAGCTTAAAT
GATGCGTCTC TTTTCTATGA ACCAGAAAGT TCTTCAGCAC TTGGTTTTGG TTTCCGTTGT
GGCTTCCTTG GTATGCTACA CATGGAAATC ATTCAAGAGC GTTTAGAGCG TGAATACGAT
CTTGACCTTA TTACAACTGC ACCAACGGTA GTGTACGAAG TTGTGTTGAA TAATGGTGAT
TTACTGTATG TAGATAGTCC AGCAAAACTG CCAGCAGTGA ACGACTTAGA CGAAATACGT
GAACCAATTG CGCGTTGTAA TATTTTGGTG CCAGCGGAAT ACTTAGGCAA TGTAATTAGC
CTATGTATTG AAAAGCGTGG TACTCAAGTT GATATGATTT ATCATGGCAA CCAAGTGGCA
TTAACTTATG ATATTCCAAT GTCTGAAGTG GTGTTAGATT TCTTCGACCG TTTGAAGTCA
ACCTCTCGTG GTTATGCATC ATTAGATTAC AACTTCCAAC GTTATGAACT TTCTAACATG
GTTCGTGTTG ACGTATTGAT TAATGCTGAA AGAGTCGATG CTCTTGCTAT CATTACTCAC
CATGATAATG CACAAGGTCG TGGTCGTTTG CTGGTTGAGA AGATGAAAGA ATTCATCCCT
CGCCAAATGT TTGATATTGC AATTCAAGCA GCAATCGGCG GGCATATTAT TGCACGTTCA
ACGGTTAAGC AATTACGTAA AAATGTAATC GCAAAATGTT ACGGTGGTGA TATTAGCCGT
AAGAAAAAAC TGTTGAAGAA GCAAAAAGAC GGTAAGAAAC GCATGAAGCA GATTGGTAAT
GTTGAATTAC CTCAAGAAGC TTTCCTTGCG ATTCTTCATG TAGGTAAAGA TTAA
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| Protein sequence | MKHIRNFSII AHIDHGKSTL SDRLIQVCGG LSDREMAAQV LDSMDLERER GITIKAQSVT
LNYTANDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
EMDLEVVPIL NKIDLPAADP DRVAEEIEDI VGIEAMEATR CSAKTGLGVD AVLETIVKCI
PAPEGNPEGP TQALIIDSWF DNYLGVVSLV RVKHGSLKKN DKIKVMSTGQ AWNVDRIGIF
TPKQVDTDGL NTGEVGWVVC GIKDILGAPV GDTLTHAKGG CEERLPGFQK VKPQVYAGLF
PISSDDYENF RDALGKLSLN DASLFYEPES SSALGFGFRC GFLGMLHMEI IQERLEREYD
LDLITTAPTV VYEVVLNNGD LLYVDSPAKL PAVNDLDEIR EPIARCNILV PAEYLGNVIS
LCIEKRGTQV DMIYHGNQVA LTYDIPMSEV VLDFFDRLKS TSRGYASLDY NFQRYELSNM
VRVDVLINAE RVDALAIITH HDNAQGRGRL LVEKMKEFIP RQMFDIAIQA AIGGHIIARS
TVKQLRKNVI AKCYGGDISR KKKLLKKQKD GKKRMKQIGN VELPQEAFLA ILHVGKD
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