| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2500 |
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| Symbol | dcuB |
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| ID | 6988787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2679390 |
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| End bp | 2680733 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380764 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_002263848 |
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| Protein GI | 209695918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATTTAT GCAGGTGGTT GTATTTTGAG TTTATCTTTC TATTACTAGT GCTCTATATT
GGCTCTCGCT TTGGCGGGAT TGGTTTAGGC GTCGTTTCTG GGATTGGTCT GGTTATTGAA
GTGTTTATCT TCAAAATGCC CCCTACATCT CCTCCCGTTA CCGTTATGCT TATTATCTTA
GCGGTTGTTA CTTGTGCATC GATACTAGAA GCCGCTGGGG GCCTCAAGTA CATGCTGCAA
GTCGCAGAGC GGATCTTAAG AAAGAACCCG AAACGCGTTA CTATCATCGC TCCTTTTGTT
ACCTATGCGA TGACATTCTT GCTAGGTACA GGTCACGCGG TATATTCGAT TATGCCTATC
ATTGGTGATG TAGCATTAAA AAATGGTATT CGACCTGAAC GCCCTATGGC GGCGGCTTCT
GTTGCCTCTC AAATCGCAAT TACCGCTTCC CCTCTTTCTG CTGCGGTTGT TTACTATTTA
GCGCAATTAG TCGATATCGA TGCATCAATT ACCTTATTGT CGATCTTAAT GGTTACGGTT
CCTTCAACGT TATTTGGTAC ACTAATGTTG GCGCTGTACA GTTTACGTCG TGGTAAAGAA
TTAGACGATG ATGAAGAGTA TCAAGCTCGT TTAAAAGATC CTATTTGGCG TGAAAAAATC
TTAAACACTA CCTCTACGTC TTTAGATGAA AAACTACCAA CCAAAGCCCG CAATGCGGTA
CTTATCTTTT TAGCTGCCAT CGTATCTATT GTTGTCATCG CTATGTTGCC AGAGATCCGT
ACCATCACAG AAGGTGGCGC TCCGATCAAA ATGTCAGTCG TGATCCAAAT GATGATGTTG
GCGTTTGGTG GTGTCATTCT ATTAGCGACG AAGACCGATC CTCGTGATGT TCCAAATGGT
GTGGTGTTTA AATCAGGTAT GGTTGCCGCG ATTGCTATCT TCGGTATTGC TTGGATGTCA
GATACCTACT TCCAATACGC AATGCCTCAA TTTAGAGCCG GAATTGTGGA TATGGTGACA
CTTCACCCAT GGACATTCAC TTTAGCGCTA TTCATTGTAT CTGTAGTGGT TAACTCTCAA
GCAGCAACGG CTCGAATGAT GTTACCTGTT GGCCTTGCTC TAGGTCTAGA GCCTGCTTTG
GTGATTGGTT TAATGCCTGC AGTTTATGGT TACTTCTTTA TTCCAAACTA CCCATCAGAT
ATTGCTACGG TTAACTTTGA TAGCTCAGGT ACGACTAAGA TTGGTAAATA CTACTTTAAC
CACTCGTTTA TGTCGGTTGG TTTAATCGGG GTAATTTCGG CCTGTATGGT CGGTTATGTA
TTAGGACAAA TAGTGATTGG TTAA
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| Protein sequence | MHLCRWLYFE FIFLLLVLYI GSRFGGIGLG VVSGIGLVIE VFIFKMPPTS PPVTVMLIIL
AVVTCASILE AAGGLKYMLQ VAERILRKNP KRVTIIAPFV TYAMTFLLGT GHAVYSIMPI
IGDVALKNGI RPERPMAAAS VASQIAITAS PLSAAVVYYL AQLVDIDASI TLLSILMVTV
PSTLFGTLML ALYSLRRGKE LDDDEEYQAR LKDPIWREKI LNTTSTSLDE KLPTKARNAV
LIFLAAIVSI VVIAMLPEIR TITEGGAPIK MSVVIQMMML AFGGVILLAT KTDPRDVPNG
VVFKSGMVAA IAIFGIAWMS DTYFQYAMPQ FRAGIVDMVT LHPWTFTLAL FIVSVVVNSQ
AATARMMLPV GLALGLEPAL VIGLMPAVYG YFFIPNYPSD IATVNFDSSG TTKIGKYYFN
HSFMSVGLIG VISACMVGYV LGQIVIG
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