| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2480 |
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| Symbol | int |
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| ID | 6988163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2654415 |
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| End bp | 2655656 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643380746 |
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| Product | integrase, phage family |
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| Protein accession | YP_002263830 |
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| Protein GI | 209695900 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00704938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAA AGACAACTCG CTTAAATAAT AAACAAATTG ATAATGCAAA AGAACGAGAG
AAAGATTATG TCCTCTCTGA TGGTGAAGGT CTTCAATTAC GAATTCGTAC TAATGGTTCT
AAACTATGGA ACTTCAACTA CATTCATCCT CAAACTAAAA AACGATTAAA TATGGGGCTA
GGTTCTTACC CTTCACTTAG TCTTGCGAAT GCCAGAAAGC TAACCGTGTC TGCAAGAGAG
TTAGTTGCGC AAGGTATAGA CCCTAAAGAA CATCGTGATG AGAAAAAACA CCAAGACCTG
ATAATTCATG AACATACTTT TTTTAATGTT GCTACTGAAT GGTTTGAGCG TAAGAAAGAT
GACATCACTG TAGATTATGC TCAAGACGTA TGGCGATCTT TAGAGCTACA TATATTCCCT
ATACTTAAAA GTACACCTGT ATCTCAAATT ACAGCACCAA TGATTATTGA ATTACTTCGA
CCAATTGAAG CGAAAGGAAG TTTAGAAACA GTTAAACGAC TGACTCAACG ATTAAATGAG
ATCATGACCT ATTCAGTAAA CTGTGGGCTT ATTCATGCTA ACCCTCTTGC AGGGATCAAA
GCTGCTTTTA AGAAACCCAA AAAAGAAAAT ATGGCGGCTC TTAAACCTGA TGAGTTACCA
GAACTTATGA TAGCCATTGC TAATGCTTCT ATTAAGCGTA CTACTCGTTG TTTAATTGAA
TGGCAACTTC ATACAATGAC TCGACCATCA GAAGCCGCTG GAACACGTTG GGAAGAAATA
GATTTAGAGA AAGGAATTTG GACAATTCCA CCAGAGAGAA TGAAAAAGCG TAGGGAACAT
CGTATACCTT TAACTGCTCA AGCTCTTTCT TTACTAGAAG TTATGAAACC TATTAGTGCT
CATAGAGAAT TTGTATTCCC TTCAGATAGA GCACCATTAA AACCATCAAA TAGCCAAACA
GCAAATATGG CAATAAAACG TATGGGTTTT GCTGGTAGGT TAGTAAGTCA TGGATTACGT
TCAGTAGCCA GTACTACGCT AAACGAACAA GGCTTTGAAT CAGACCTAAT TGAAGCGGCT
CTTGCCCACG TAGATGACAG TCAAGTACGT GCGGCTTATA ACCGTACTGA TTATCTTGAA
CGAAGAATAC CGATGATGAA GTGGTGGAGT GGACATATTG AGGAAGCATC GAAAGGAAGT
TTATCTATAT CAGGAATGAA GTGTTTATCT TTGGTTGGAT AA
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| Protein sequence | MALKTTRLNN KQIDNAKERE KDYVLSDGEG LQLRIRTNGS KLWNFNYIHP QTKKRLNMGL
GSYPSLSLAN ARKLTVSARE LVAQGIDPKE HRDEKKHQDL IIHEHTFFNV ATEWFERKKD
DITVDYAQDV WRSLELHIFP ILKSTPVSQI TAPMIIELLR PIEAKGSLET VKRLTQRLNE
IMTYSVNCGL IHANPLAGIK AAFKKPKKEN MAALKPDELP ELMIAIANAS IKRTTRCLIE
WQLHTMTRPS EAAGTRWEEI DLEKGIWTIP PERMKKRREH RIPLTAQALS LLEVMKPISA
HREFVFPSDR APLKPSNSQT ANMAIKRMGF AGRLVSHGLR SVASTTLNEQ GFESDLIEAA
LAHVDDSQVR AAYNRTDYLE RRIPMMKWWS GHIEEASKGS LSISGMKCLS LVG
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