Gene VSAL_I2470 details

Gene Information

• Locus tag: VSAL_I2470
• Symbol: dnaJ
• ID: 6987771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2643549
• End bp: 2644691
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643380736
• Product: chaperone protein DnaJ
• Protein accession: YP_002263820
• Protein GI: 209695890
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAC GTGATTTTTA TGAAGTATTA GGTGTTAGCC GTGATGCTTC TGAGCGTGAT 
ATAAAGAAAG CCTATAAACG TCTAGCAATG AAATTCCATC CAGACCGTAA TCAGGGTGAT 
GAAACTGCGC CAGAAAAGTT TAAAGAAGTA AAAGTTGCGT ATGAAATCCT AACTGATGCT 
CAAAAGCGTG CGGCATATGA TCAATACGGT CATGCGGCTT TTGAACAAGG TGGTATGGGT 
GGTGGCGGCG GCTTTGGCGG CGGTCAAGGT GACTTTGGCG ATATTTTTGG CGATGTGTTT 
GGTGATATTT TTGGTGGTGG CCGTCGTGGC GGTCAGCAAC GTGCACAACG TGGTTCAGAT 
TTACGTTACA ACATGGAACT TACGCTAGAA GAAGCGGTTC GTGGTTGTGA GAAAGACATT 
GAAATTCCAA CGTTAGCGGC CTGTGAACCA TGTGATGGAA CGGGCGCTAA AAAAGGGACT 
TCTTCAACAA CTTGTAGCAC GTGTCATGGT CAAGGCCAAG TTCAAATGCG TCAAGGCTTC 
TTTGCTGTGC AGCAGGCATG TCCTACTTGT CATGGTAAAG GTAAGATCAT TAAAGACCCA 
TGTAATTCTT GTCATGGCGA TGGTCGAGTA CAAAAGACAA AAACACTTAA CGTTAAGATT 
CCTTCTGGTG TAGATACGGG CGATCGCATT CGTTTATCTG GTGAAGGCGA AGCCGGAGAG 
CACGGCGCTC CAGCAGGCGA TCTATACGTA CAAGTTCATG TAAAAGAACA CAATATCTTT 
GATCGTGACG GTAACAACTT ATACTGTGAA GTGCCAGTAA GCTTTACGAT GGCTGCGTTA 
GGTGGTGAAG TTGAAGTCCC TACACTTGAT GGGCGTGTAA GCCTAAAAGT ACCACTAGAA 
ACACAAACGG GCCGTATGTT CCGTATGCGT GGTAAAGGGG TTAAAGGTGT TCGTACTCAC 
AGTGCGGGTG ACTTAATCGT TAAGTTAATT GTTGAAACTC CAGTTAAATT AACGAAACGC 
CAAAGAGAGC TACTTAAAGA ATTCCAAGAA TCATTTGATG GGAAAGATGC GAAGAAGCAC 
AATCCTAAAT CAGAAGGTTT CTTATCTGGT GTTAAGAACT TCTTTGATGA TTTAACTAAA 
TAA 

 

Protein sequence

MSKRDFYEVL GVSRDASERD IKKAYKRLAM KFHPDRNQGD ETAPEKFKEV KVAYEILTDA 
QKRAAYDQYG HAAFEQGGMG GGGGFGGGQG DFGDIFGDVF GDIFGGGRRG GQQRAQRGSD 
LRYNMELTLE EAVRGCEKDI EIPTLAACEP CDGTGAKKGT SSTTCSTCHG QGQVQMRQGF 
FAVQQACPTC HGKGKIIKDP CNSCHGDGRV QKTKTLNVKI PSGVDTGDRI RLSGEGEAGE 
HGAPAGDLYV QVHVKEHNIF DRDGNNLYCE VPVSFTMAAL GGEVEVPTLD GRVSLKVPLE 
TQTGRMFRMR GKGVKGVRTH SAGDLIVKLI VETPVKLTKR QRELLKEFQE SFDGKDAKKH 
NPKSEGFLSG VKNFFDDLTK