| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2432 |
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| Symbol | secF |
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| ID | 6987749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2603684 |
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| End bp | 2604634 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380702 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002263786 |
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| Protein GI | 209695856 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAAA TAATGAAAGC AGAGAAAACG ATCGACTTTA TGCGTTGGTC TAAGCCTGCC
TTTTTCTTCT CCATGCTGAT GATTGTAGCG TCAATTGCTA CGCTATCAAC AAAGTGGTTG
AATTGGGGGC TAGATTTTAC GGGCGGAACG TTAATTGAAG TCGGTTTTGA ACAGCCAGCT
CAGTTAGAAG ATATTCGTGG CGCGCTACAA GCAAAAGGCT TTGGTGATGC GACGGTACAA
AACTTTGGTA CAGCACGTGA TGTAATTGTT CGTCTTCAAC CTCGAGAAGG CATGAAAGGA
GAGCAATTAG GTAATCAAAT CATTAGTGCG ATTAAAGAAG GTACGGGCGA TCAAGTTGAG
ATGCGTCGTA TTGAGTTTGT CGGCCCAAAT GTAGGGGGAG AATTAGCGGA GTCGGGTGGT
TTAGCTATCC TTGTGTCTTT GTTATGCATC TTGGCTTATG TGTCGATTCG TTTCCAGTGG
CGTTTAGCTG CGGGTGCTGT ATTAGCATTG GCCCACGATA TAATTATCAC GCTAGGTATT
TTCTCATTCT TACAAATTGA AGTCGATTTA ACGATTATCG CGGCACTATT AACCGTTGTG
GGGTATTCCT TGAATGATAC CATTGTTGTA TTTGATCGGA TCCGTGAAAA CTTCTTAAAA
ATGCGTAAAG GTGCTCCTGA AGAAATAATG AATGATTCCA TTACTCAAAC GTTAAGCCGT
ACGTTGATTA CATCAGCAAC GACTTTGTTT GTGGTTATCG CATTGTTTGT TCAAGGCGGA
GCAATGATCC ATGGTTTTGC TCTGGCATTA CTATTAGGTA TTACGGTTGG TACGTATTCT
TCTATCTACG TAGCTTCTGC ATTGGCTCTC AAATTAGGTA TTACACGCGA ACATCTAATG
CCAACACCTA TCGATAAAGA AGGTGAGGAA GAATTTGAAG AAATGCCTTA A
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| Protein sequence | MFQIMKAEKT IDFMRWSKPA FFFSMLMIVA SIATLSTKWL NWGLDFTGGT LIEVGFEQPA
QLEDIRGALQ AKGFGDATVQ NFGTARDVIV RLQPREGMKG EQLGNQIISA IKEGTGDQVE
MRRIEFVGPN VGGELAESGG LAILVSLLCI LAYVSIRFQW RLAAGAVLAL AHDIIITLGI
FSFLQIEVDL TIIAALLTVV GYSLNDTIVV FDRIRENFLK MRKGAPEEIM NDSITQTLSR
TLITSATTLF VVIALFVQGG AMIHGFALAL LLGITVGTYS SIYVASALAL KLGITREHLM
PTPIDKEGEE EFEEMP
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