Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2425 |
Symbol | pyrH |
ID | 6988564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2595447 |
End bp | 2596178 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380695 |
Product | uridylate kinase |
Protein accession | YP_002263779 |
Protein GI | 209695849 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000236228 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGA ACCCGAAACC AGTATATCAG CGTATTCTAT TAAAACTTAG TGGTGAAGCA CTTCAAGGCG AAGAGGGTTT TGGTATTGAC CCTGCAACTC TTGAGCGTAT GGCTCAGGAA GTAAAAGAAC TGATTGAACT TGGTGTTCAA GTTGGTGTTG TTATTGGTGG CGGTAATCTT TTCCGCGGAG CCGGTCTTGC TGAAGCAGGC ATGAATCGTG TTGTTGGTGA CCACATGGGT ATGCTAGCAA CGGTAATGAA TGGCCTTGCT ATGCGTGATG CGCTTCATCG TGCTTATGTT AATGCTCGTG TTATGTCTGC GATTCCTCTA AAAGGCGTGT GTGACGATTA CAACTGGGCT GACGCTATCG CTCAACTTCG TCAAGGCCGC GTAGTGATTT TCTCTGCAGG CACAGGCAAC CCATTCTTTA CGACAGATTC AGCTGCGTGT TTACGTGGTA TTGAAATCGA AGCTGATGTT GTATTAAAAG CAACCAAAGT TGATGGCGTA TACACTGCTG ACCCGGTATC TAACCCTGAT GCAGAATTAT ATGATAAACT TGATTACAAC ACAGTTCTTG AAAAAGAATT AAAAGTTATG GACTTAGCAG CGTTTACTCT TGCTCGTGAC CACAAAATGC CAATTCGTGT GTTTAATATG AACAAACCTG GTGCATTACG TCGTGTAGTA ATGGGTGAGG CAGAAGGTAC TTTAATCAGC AGTGCTGAAT AA
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Protein sequence | MTTNPKPVYQ RILLKLSGEA LQGEEGFGID PATLERMAQE VKELIELGVQ VGVVIGGGNL FRGAGLAEAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARVMSAIPL KGVCDDYNWA DAIAQLRQGR VVIFSAGTGN PFFTTDSAAC LRGIEIEADV VLKATKVDGV YTADPVSNPD AELYDKLDYN TVLEKELKVM DLAAFTLARD HKMPIRVFNM NKPGALRRVV MGEAEGTLIS SAE
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