| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2420 |
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| Symbol | ecfE |
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| ID | 6989423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2590443 |
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| End bp | 2591801 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380690 |
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| Product | protease EcfE |
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| Protein accession | YP_002263774 |
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| Protein GI | 209695844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0697135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC TACTTTGGAA TTTAGCATCG TTTATCATTG CTCTCGGTAT TTTGGTTGCC
GTGCATGAGT ATGGCCATTT CTGGGTAGCT CGCCGTTGTG GCGTTATTGT TGAAAAATTC
TCTATTGGAT TTGGTAAATC TATTTGGAGT AGAAAAGGCA AAGACGGTAC AGAATACAGC
ATTTCAATGA TCCCTTTAGG TGGATATGTG AAGATGCTGG ATGAGCGAGT CGATGACGTC
CCTGAAGAAT TAAAAAAACA CGCATTTAAT AATCGTCCGT TATGGCAACG AAGTGCAATT
GTTGCTGCGG GTCCTATTGC TAACTTTATT TTTGCCGTTT TTGCTTGTTG GTTAGCTTTC
ATGATCGGGG TGACTGCATT AAAGCCAGTA GTTGGTTCTG TTGAAAACAA CTCTATATTT
TCTCAAGCAG GAATTGAATC TGGAGTGGAA CTAAAAGCCA TTTCAGGAAT CAAAACCTCG
GATTGGGAAT CGGTTAATAT GGCGATTGTT TCTCATATTG GTGATGAATC AATGACGGTA
ACTTATAGTG ACAGCGATAA TATTGGTGTT GATGTAACTA AGCGTTTGGA TCTATCGTCA
TGGAAATTCG ATCCTGAAAA AGATTCACCA ATGCTAACGT TGGGTTTTAG ACCTTACCGA
CCAGAAGTAA CATTAACGAT AGCTAATGTT AGTGATAATA GTGCCGCGAG TCGTTCTGGA
ATGTTAATTG GGGATATTCT TTCTTCAGTG AACGGTAAAG AATTATCCAA ATGGCAGCAA
ATGGTGGATG AAATTCAAGG CAATCCTAGT GCGCCAATGT CAATTGTTGT TATTCGTGAT
GGCATTGATA CGACATTGAC GTTAACACCA GATAGCCGCG AGGATTCGGA AGGTAAATTA
ATCGGTTTTG CTGGTGTTTC ACCTGAGTTT AAAGGGTGGC CTGAAGGATA TCGTTATGAA
AAACAATATG GTCCAATTGT TGCGTTAGAA AAAGCAATGA TAAAAACTGG CAATATTATA
GATTTAACAT TAACCATGAC TAAGAAGTTA TTCACGGGTG ATGTCGCTTT AAACAACCTA
AGTGGTCCTA TTTCTATAGC AAAAGGAGCA GGGGCCACCG CGGATTATGG TATTGTTTCA
TTTTTAGGAT TTTTAGCCTT AATTAGCGTA AATTTAGGTA TTATCAATTT ATTACCTCTT
CCGGTATTGG ATGGCGGTCA TTTACTGTTT TTTGCTATCG AGGGAATTAC ACGTAAACCC
GTACCAGAAA GAGTTCAAGA AATCGGTTAT AAAGTAGGAA CAGCACTTAT TATGTCTTTA
ATGGCTGTTG CATTATTTAA CGACTTTATG CGCCTTTAA
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| Protein sequence | MSELLWNLAS FIIALGILVA VHEYGHFWVA RRCGVIVEKF SIGFGKSIWS RKGKDGTEYS
ISMIPLGGYV KMLDERVDDV PEELKKHAFN NRPLWQRSAI VAAGPIANFI FAVFACWLAF
MIGVTALKPV VGSVENNSIF SQAGIESGVE LKAISGIKTS DWESVNMAIV SHIGDESMTV
TYSDSDNIGV DVTKRLDLSS WKFDPEKDSP MLTLGFRPYR PEVTLTIANV SDNSAASRSG
MLIGDILSSV NGKELSKWQQ MVDEIQGNPS APMSIVVIRD GIDTTLTLTP DSREDSEGKL
IGFAGVSPEF KGWPEGYRYE KQYGPIVALE KAMIKTGNII DLTLTMTKKL FTGDVALNNL
SGPISIAKGA GATADYGIVS FLGFLALISV NLGIINLLPL PVLDGGHLLF FAIEGITRKP
VPERVQEIGY KVGTALIMSL MAVALFNDFM RL
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