Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2418 |
Symbol | |
ID | 6988760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2587403 |
End bp | 2587918 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380688 |
Product | outer membrane protein |
Protein accession | YP_002263772 |
Protein GI | 209695842 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGA ATAAGTTGGT AAAAGCAGCC GCTTTAGGCA CCGTTTTGTT AAGTGGTTCT TTTTTCGCTA ATGCAGCAGA AGCAGCAACG AAAATTGGTT ATGTAAACAT GGCTCAAATT GTTCAGCAAA TGCCACAAGG TGAAGCTATT TCAGAAAAGC TTCGTGCAGA ATTTAAAGAT CGTATCGATG AGCTTCGTGG CTTAGAGTCA AAAATCAAAG ATAAAGTAGA AACGATTAAA CGTGATGGTG AGCTACTTGG TAATTCAGGT AAAACAAAAC TTGAGCGTGA AATTGCGTCT TTGCAATCAG ATTATAAACT GAAGGCTCAA GCATTAGATG AAGATAATCG TCGTCGTCAA GGCGAAGAGC GTCAGAAACT AATCATGCAA GTTCAACAAA CAGTTGAAAA AGTAGCAAAC AAAGAAGGCT ACGATATGGT TGTTGATGCA GCAACTCTAC TTTGGGCACA ACCTGAAGAC AACCTATCAG AAAAAGTAAT CAAAGCAATT AAATAA
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Protein sequence | MILNKLVKAA ALGTVLLSGS FFANAAEAAT KIGYVNMAQI VQQMPQGEAI SEKLRAEFKD RIDELRGLES KIKDKVETIK RDGELLGNSG KTKLEREIAS LQSDYKLKAQ ALDEDNRRRQ GEERQKLIMQ VQQTVEKVAN KEGYDMVVDA ATLLWAQPED NLSEKVIKAI K
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