Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2416 |
Symbol | fabZ |
ID | 6988757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2585795 |
End bp | 2586274 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380686 |
Product | (3R)-hydroxymyristoyl-ACP dehydratase |
Protein accession | YP_002263770 |
Protein GI | 209695840 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTGT TTTACAGGAA TACTATTTTG ACTCGTGAAA ATAAAACACT AACGATTACA GAGATTCAGG CACTATTGCC TCACCGTTAC CCATTTTTAT TAATTGACCG CGTAATCGAC TTTGAAGAAG AAAAGTACTT GCATGCGATT AAAAACGTGT CAGTTAATGA GCCTCAGTTT ACGGGTCACT TCCCTCAAAT GCCTATATTT CCCGGTGTTC TTATTCTTGA AGCTATGGCT CAAGCAACGG GTTTGTTAGC GTTTAAATCG TTTGGTGCTC CTGCTGAAAA TGAATTGTAT TATTTTGCTA GTATTGATAA AGCAAAATTC CGTAAGCCAG TAGTGCCTGG TGATCAGCTT GTTCTTGAAG TTGAATTCAT TAAAGATCGT CGCGGTATTG CTCTATTTAA TGGTGTCGCA AAAGTTGATG GCGCTGTCGT ATGTTCTGCT GAACTTAAAT GTGCGAGACG AGAGTTTTAA
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Protein sequence | MILFYRNTIL TRENKTLTIT EIQALLPHRY PFLLIDRVID FEEEKYLHAI KNVSVNEPQF TGHFPQMPIF PGVLILEAMA QATGLLAFKS FGAPAENELY YFASIDKAKF RKPVVPGDQL VLEVEFIKDR RGIALFNGVA KVDGAVVCSA ELKCARREF
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