| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2395 |
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| Symbol | fadE |
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| ID | 6987735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2563944 |
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| End bp | 2566391 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380666 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_002263750 |
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| Protein GI | 209695820 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCA CACTACTAAC AACATTAATT GCACTTGCTG CATTAAGTTA TCATCGACAA
TCATTACAAA CTGCTACGCT AGTAACGGCA GCAATTTTGG CGGTGAGTAC CGGATTAGGT
TATGCCGGCG TTATCACTTG GGCTATTTTT TTAGCAATCG CGGTACCTCT AAACATCCCT
TCAATTAGGC AATCTCTGTT TAGTAATAAA GCCTTATCGA TGTTTAAAGG TGTTATGCCT
GAAATGTCAA AAACAGAAAA AGATGCCATT GAAGCGGGTA CGGTTTGGTG GGAAGCAGAG
CTGTTTAAGG GAAATCCTGA TTGGAAATTC CTTCATAATA TTCCTAAAAA TACACTATCC
GATGAAGAAC AAGCATTCAT GGATGGCCCA GTAAACGAAG TGTGCCGCAT GATCAATGAT
TATGAAGTCA CTCATGAGCT TGCTGATTTG CCACCAGAAG TATGGCAATA CCTGAAAGAT
AACAAATTCT TTGCCATGAT CATTAAGAAA AAATACGGTG GTTTAGAATT CTCAGCTTAT
GCACAATCTT CTGTTCTACA AAAATTGACC AGTGTTTCTG GTGTTTTATC TATTACGGTT
GGGGTTCCGA ATTCATTAGG TCCAGGCGAA CTTCTTCAAC ATTACGGTAC TGAAGATCAA
AAAAATCATT ATTTACCTAG CTTAGCCGAA GGTAAGGAAA TCCCATGTTT TGCACTAACT
AGCCCAGAAG CGGGCTCCGA TGCAGGGTCA ATTCCTGATT TTGGTATCGT GACAAAAGGC
ATGTGGGAAG GTAAAGAAGT ACTAGGTATG CGCCTTACTT GGAATAAGCG TTACATTACC
CTAGCCCCTG TCGCTACCGT TTTAGGTTTG GCGTTTAAAT TACAAGATCC TGATGGTTTA
TTAGGCGATA AGAAAAACCT AGGCATTACT TGTGCTCTTA TTCCAACAAA CTTAGAAGGC
GTTAAAATTG GACGCCGCCA TTTCCCTATG AATGTTCCAT TTCAAAATGG TCCAACACAA
GGTGACGATT TATTTGTTCC ACTTGATTAC ATCATCGGTG GTGAAAAAAT GGCAGGTCAC
GGTTGGCGCA TGCTGGTTGA ATGTCTGTCT GTGGGTCGAG GAATCACCTT ACCATCCAAT
GCAACGGGTG GCGCAAAAAC GGCCGCACTC GCTACGGGAG CTTATGCACG AATTCGTCGC
CAATTCAAAT TACCCATTGG TAAAATGGAA GGGATTGAAG AGCCATTAGC GCGTATGGCT
GGTAATGCTT ACATGATGGA CGCAGCAAGT GCGCTAACGG TTGCTGGTAT TGTGCAAGGC
GAGAAGCCAT CGGTTATCTC TGCCATTGTA AAATATCACT GTACCCACCG TGCACAACGT
ATTGCCATTG ATGGTATGGA CATCGCTGGT GGTAAAGGGA TCTGTCTAGG CAGTTCTAAT
TTCTTGGCGC GCAGTTATCA AGGTTCACCA ATCGCCATTA CCGTTGAAGG CGCAAACATA
CTAACCCGTT CAATGATTAT CTACGGTCAA GGTGCTATTC GCTGCCACCC TTATGTTCTT
GAAGAAATGG ACGCGGCCTA CTTAGAAGAT AAGCAAGCGT CTCTTGATAA ATTCGATGCT
GCTGTCTTTG GTCATATTGG CTTTGGGATC AGTAATTTTG TACGCAGTTT ATGGTTTGGC
CTAACCGATG GTCGTGGTTC AAAAACCGCC TTTAACGATG AAACCAAACG TTATTACCAA
CAAGTAAATC GTTATAGTAC GAACTTAGCA TTACTATCTG ATGTATCAAT GGCTGTTCTT
GGCGGCAGTT TGAAGCGCCG TGAACGCATG TCAGCACGTC TAGGTGACAT TTTAAGTCAA
CTGTATCTAA CAACGTCAGT ACTTAAGCGT TTTGATGATG AAGGTCGTCA GAAGGAAGAT
TTACCATTAG TACATTGGAG CGTGCAAGAT TCGTTACATC AAGCAGAGCA AGCGATTGAT
GGGTTATTAA GTAATTTCCC AAATCAATTT ATCGCCAAAG CAATGCGTTT AATCCTGCTT
CCAACCGGGC TTCGTCGTCA ACGCCCAAGT GATAAACTGG ATCATAAATT AGCTCGAATT
CTTCAAGAGC CATCAGGAGT CCGTAGTCGA ATTGGTCGAG GTCTGTTCTT AGAGGCGAGT
CGCTTTAATC CGGTAGGTAA AATGGAAGAA GCACTGATTG ATATCTTAAC CGCAGAACCA
ATTTATGATC GTGTATGTAA AGAATCAAAA CAACGTCTAC CCTTCATGCA ATTAGATCGT
GTTGCAAAAA TCGGTTTAGA GTTAAATATT ATTTCAGATA AAGAAGCCCT ACTACTTCGT
AAAGCAGAGA AAAGTCGACT AGCGACGATT AGTGTTGAAG ATTTTGACCC AAGTGAGCTT
ATCGTAAAGC CAGAAGTTAA TCATTTTGAA CACAGTAAAA TTGCTTAG
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| Protein sequence | MALTLLTTLI ALAALSYHRQ SLQTATLVTA AILAVSTGLG YAGVITWAIF LAIAVPLNIP
SIRQSLFSNK ALSMFKGVMP EMSKTEKDAI EAGTVWWEAE LFKGNPDWKF LHNIPKNTLS
DEEQAFMDGP VNEVCRMIND YEVTHELADL PPEVWQYLKD NKFFAMIIKK KYGGLEFSAY
AQSSVLQKLT SVSGVLSITV GVPNSLGPGE LLQHYGTEDQ KNHYLPSLAE GKEIPCFALT
SPEAGSDAGS IPDFGIVTKG MWEGKEVLGM RLTWNKRYIT LAPVATVLGL AFKLQDPDGL
LGDKKNLGIT CALIPTNLEG VKIGRRHFPM NVPFQNGPTQ GDDLFVPLDY IIGGEKMAGH
GWRMLVECLS VGRGITLPSN ATGGAKTAAL ATGAYARIRR QFKLPIGKME GIEEPLARMA
GNAYMMDAAS ALTVAGIVQG EKPSVISAIV KYHCTHRAQR IAIDGMDIAG GKGICLGSSN
FLARSYQGSP IAITVEGANI LTRSMIIYGQ GAIRCHPYVL EEMDAAYLED KQASLDKFDA
AVFGHIGFGI SNFVRSLWFG LTDGRGSKTA FNDETKRYYQ QVNRYSTNLA LLSDVSMAVL
GGSLKRRERM SARLGDILSQ LYLTTSVLKR FDDEGRQKED LPLVHWSVQD SLHQAEQAID
GLLSNFPNQF IAKAMRLILL PTGLRRQRPS DKLDHKLARI LQEPSGVRSR IGRGLFLEAS
RFNPVGKMEE ALIDILTAEP IYDRVCKESK QRLPFMQLDR VAKIGLELNI ISDKEALLLR
KAEKSRLATI SVEDFDPSEL IVKPEVNHFE HSKIA
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