Gene VSAL_I2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2350 
SymbolgltX 
ID6987711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2522708 
End bp2524132 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content40% 
IMG OID643380623 
Productglutamyl-tRNA synthetase 
Protein accessionYP_002263707 
Protein GI209695777 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTA AAACACGTTT TGCTCCAAGC CCAACAGGCT ACCTTCACGT TGGTGGTGCA 
CGCACTGCAC TTTATTCATG GCTTTTTGCT AAAAACAAAG GCGGCGAATT TGTACTTCGT
ATTGAAGACA CAGATTTAGA ACGTAACTCT CAAGAAGCGG TTGATGCAAT TCTTGAAGGC
ATGAAGTGGA TGGGAATGGA GTGGGACGAA GGTCCATACT ACCAATCTAA GCGTTTTGAT
CGTTATAACG AAGTCGTAGA TCTATTGCTT TCTGAAGATA AAGCATACAA ATGTTATGCT
TCAAAAGAAT TGCTTGATGA AATTCGTACA GAGCAAGAAG AAAATAAAGA GATGGCTCGC
TACGATGCAA ACCATCCTAA AATTGTTGCC GCAAATGCCG CAGCAAAAGA AGGCGATGCT
TCTGTTATTC GCTTCCGTAA TCCAAAAGAA GGCAGTGTTG TCTTTGATGA CCAAATCCGT
GGTCGTATTG AAATCTCAAA CAGCCAATTA GATGACTTGA TCATTCGTCG TACTGATGGT
GCACCAACGT ATAACTTCGT TGTTGTCGTT GATGACTGGG ATATGGGTAT TACTCAGGTT
ATTCGTGGTG AAGATCATAT TAATAATACA CCTCGTCAAA TCAATATCTA TGAAGCACTT
GGTGCTCCAG TACCAATGTT TGCACACTGT GCAATGATCC TTGGTGATGA TGGCGCTAAA
TTATCTAAGC GTCATGGCGC GGTATCGGTA ATGCAGTATC GTGATGAAGG CTATCTACCT
AATGCACTAA ATAACTATTT AGTTCGTCTT GGTTGGTCTC ATGGCGATCA AGAAATCTTC
TCTCAAGAAG AAATGATTAA CTTATTTAGC TTAGATGCAG TAAGTAAATC AGCGTCGGCG
TTTAATACTG ATAAACTTCG TTGGTTGAAC AATCATTACA TCAAAACATC TGAACCAGAA
TATGTAGCTA ACTACCTACA ATGGCATTTA GATCAAAAAG AAATCTCTTT AGACAATGGT
CCTGCAATTA CTGACGTTAT TACGTTAGTT AGTGAGCGTT GTAATACATT GATTGAGCTG
GCTGACCAAT CTCGTTATTT CTACGAAGAC TTCGAAGCAT TTGATGCTGG TGCAGCTAAA
AAACATCTAC GTGGTGTTGC AAAAGGTCCT TTAGAATTAG CGCTTGCTAA AATTGAAGCT
CTACAAGAGT GGACAACAGA GAATCTGCAT AACGTTATTG AAGAAGTTTG TGCAGAGCTA
GAAATCGGTA TGGGTAAAAT TGGTATGCCT TTGCGTGTAG CCGTTACTGG CGGTGGTCAA
TCACCATCAG TTGACGCTGT AATGCAGTTA ATCGGTAAAG AACGAGTAGT TACTCGAATT
AAGATGGCGT TAGCATTTAT TGCTGAACGT GAAGCGAACG CTTAA
 
Protein sequence
MTVKTRFAPS PTGYLHVGGA RTALYSWLFA KNKGGEFVLR IEDTDLERNS QEAVDAILEG 
MKWMGMEWDE GPYYQSKRFD RYNEVVDLLL SEDKAYKCYA SKELLDEIRT EQEENKEMAR
YDANHPKIVA ANAAAKEGDA SVIRFRNPKE GSVVFDDQIR GRIEISNSQL DDLIIRRTDG
APTYNFVVVV DDWDMGITQV IRGEDHINNT PRQINIYEAL GAPVPMFAHC AMILGDDGAK
LSKRHGAVSV MQYRDEGYLP NALNNYLVRL GWSHGDQEIF SQEEMINLFS LDAVSKSASA
FNTDKLRWLN NHYIKTSEPE YVANYLQWHL DQKEISLDNG PAITDVITLV SERCNTLIEL
ADQSRYFYED FEAFDAGAAK KHLRGVAKGP LELALAKIEA LQEWTTENLH NVIEEVCAEL
EIGMGKIGMP LRVAVTGGGQ SPSVDAVMQL IGKERVVTRI KMALAFIAER EANA