| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2330 |
|---|
| Symbol | flgJ |
|---|
| ID | 6988527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2505589 |
|---|
| End bp | 2506587 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380603 |
|---|
| Product | flagellar rod assembly protein/muramidase FlgJ |
|---|
| Protein accession | YP_002263687 |
|---|
| Protein GI | 209695757 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATT CAGTAAATAT GACAGACGTT GGCTTTATCC ACGATGTGGG TGGCCTAGAT
AAATTACGTA AAAGTGCGGT AAATGGCGAT CAAGAAAGCC AAGACAAAGC CTTGCGTGCG
GCGGCTGTGC AGTTTGAATC GATCTTTACA CAAATGCTTT TTAAATCAAT GCGTAATGCT
AATAGTTCAT TTAAATCAGA CATGATGAGC AGTGATAATC AAAAGTTCTT TGAGCAAATG
CGTGACGACC AAATGTCGAC CGAATTATCA AAGCAAGGCT CGCTAGGATT AGCGGATATG
ATTGTTGCAC AACTTGGTGC CTCACTAAAT CAAGAACCGC CAGTGCACAA TGGCAAGAAT
TTAGAGCAAA ATGCACGAGT GGCAATGCGA AGAGCGGCAA CGGATGAAAC ATTGCGTTTG
CCTGCTGAGC ATCAACCCCT GTCTGCGGCA AAACAAGCGT CACAAACCGA ATCACCATCG
GCCGTTAAAT TAGAACAAAT GCTAGCGGCA AGACAAATTC AACAGTCTGA GAAGTTTGAT
TCACCTCAGC AATTTGTTGA TACGATGAAG CCATACGCTG AAAAAGCGGC AAAGGCCTTA
GGTATTGATT CAAATGTATT AATCGCTCAG GCCGCATTAG AAACTGGCTG GGGTAAGAAA
GTTATCAAGA ATTCAGTGGA TTCAAGCCAT AACTTATTCA ACATTAAAGC AGACAGAAGC
TGGCAAGGCG ATAAGATCGC TAAAAATACG TTGGAATATC ACGATAACAT TGCCGTTTCA
GAGAATGCCG CTTTCCGTTC ATACGACAAT TATGAAGAAA GCTTCAGTGA CTTTGTGCGT
TTCTTAAATC AAAATCCACG TTATGAACGC GCATTGCAAC AAACACAAAG TTCAGAAAGC
TTTATTAAAG GCATTCACAG TGCGGGTTAT GCAACGGATC CTAATTACTC AAGTAAAGTA
ATGAGCGTAA TGAAGACGGT TGAAGACTTA CTAAAATAA
|
|---|
| Protein sequence | MNNSVNMTDV GFIHDVGGLD KLRKSAVNGD QESQDKALRA AAVQFESIFT QMLFKSMRNA
NSSFKSDMMS SDNQKFFEQM RDDQMSTELS KQGSLGLADM IVAQLGASLN QEPPVHNGKN
LEQNARVAMR RAATDETLRL PAEHQPLSAA KQASQTESPS AVKLEQMLAA RQIQQSEKFD
SPQQFVDTMK PYAEKAAKAL GIDSNVLIAQ AALETGWGKK VIKNSVDSSH NLFNIKADRS
WQGDKIAKNT LEYHDNIAVS ENAAFRSYDN YEESFSDFVR FLNQNPRYER ALQQTQSSES
FIKGIHSAGY ATDPNYSSKV MSVMKTVEDL LK
|
|---|
| |