| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2269 |
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| Symbol | |
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| ID | 6988478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2443564 |
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| End bp | 2444811 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380547 |
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| Product | outer membrane protein transport protein |
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| Protein accession | YP_002263631 |
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| Protein GI | 209695701 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00153589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA AGCGTCTGTT TTCAAAAACA CTTCTAGCAG CGACCATCAC TCTTGCAACA
CAACAGGCTA CCGCTGCTGG TTTCCAACTA AACGCTCAAT CAGCAACAGG TCTAGGCCGT
GCATTTGCTG GTGATGCTGT AATCGCTGAT AACGCATCAG TAATGTCACG TAACGCCGCT
GCAATGGCTC TTTTTGATTC ATCACAGTTT TCTACTGGTG TTAACTACAT CAAAACAGAT
ATTGATGTGA CTGATATTGG TTATGCTGGA CAAAACATTT CAGATACAAA CAACAGTAGT
GGTACGGCGG TTCCAAATAT CTATTACATC CACCGTTTAA ATGACCAATG GGCATTTGGT
GCAGGTATCT ATTCCAACTT CGGCACGACA AATAATTTTG ATAGCAATTT TGGTTCAGAC
TCAATGATAC CAGGAGCTAG CGTTTACGGC GGTACAACTG AAATTAAAAG CATTAATTAT
GCTTTAACAG TTTCTTACCG CATTAACGAG CAATTTAGTC TTGGTGGTGG TTTAGACATC
GTTCAAGGTA CAGGTACCTT AAAAAGAGAA TCAGCCTTAT TAACTCCTAC AGGTAATACA
ACCGCTCTGG ATGTCGAAGC TGATGGCGTC GGTCTAGGTT GGAATCTTGG TGCCGTTTAT
GAACTAGATA AAGGTAATCG TTTCGGCTTC TCATACCACT ATAGCCCTGA AATAGAAGCT
GAAGGTGATA TGTACATGAA TAATGGCGCA GGTGGCAACG CTATCGATGG TCACAAATTA
TTAATGCCGC TACCAAGTAT GGCTGAGTTT TCTGGCTACC ATGAAATCAA AGACACTAAA
TTTGCAGTTC ACTACTCAGT ACAGTGGATT GGTTGGAGTG CATTTGACGA GCTAAATACT
AAAGAAGGCG TAAATATTAA CAACTATGAG TGGCAGAATG GTATGCATTA CGCAATTGGT
GGTACTTACT TCCTAAATGA TGCATGGACA CTGCGTGCTG GTTACATGTA CGACACTTCA
GCTCAAGATG AACTAACATC TATTTCTGTA CCTGATTCAG ACCGTCAATG GCTTTCTGGT
GGTTTCAGCT ACCACTTTGC TAAAAAACAT ACGGTTGATT TCGGCATAAC TTACCTAATG
GGTGATGATG TTGATGTTTC AGAAACATCA GCTCCAACAC CAACACTAAC AGCAACTACA
CACGCAGATG CAATTCTTGC TGGTGTTCAG TACAGCTACA GCTTCTAA
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| Protein sequence | MNKKRLFSKT LLAATITLAT QQATAAGFQL NAQSATGLGR AFAGDAVIAD NASVMSRNAA
AMALFDSSQF STGVNYIKTD IDVTDIGYAG QNISDTNNSS GTAVPNIYYI HRLNDQWAFG
AGIYSNFGTT NNFDSNFGSD SMIPGASVYG GTTEIKSINY ALTVSYRINE QFSLGGGLDI
VQGTGTLKRE SALLTPTGNT TALDVEADGV GLGWNLGAVY ELDKGNRFGF SYHYSPEIEA
EGDMYMNNGA GGNAIDGHKL LMPLPSMAEF SGYHEIKDTK FAVHYSVQWI GWSAFDELNT
KEGVNINNYE WQNGMHYAIG GTYFLNDAWT LRAGYMYDTS AQDELTSISV PDSDRQWLSG
GFSYHFAKKH TVDFGITYLM GDDVDVSETS APTPTLTATT HADAILAGVQ YSYSF
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