Gene VSAL_I2245 details

Gene Information

• Locus tag: VSAL_I2245
• Symbol: tmk
• ID: 6987670
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2415595
• End bp: 2416227
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643380527
• Product: thymidylate kinase
• Protein accession: YP_002263610
• Protein GI: 209695681
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0597865
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAT TTATTGTTAT TGAAGGCCTT GAAGGCGCGG GTAAAAGCAC CGCAATTAAG 
AACGTATTAG CAACACTGGC TAAGCATGGA ATTACAGCAC CAGTGACGAC AAGAGAGCCC 
GGTGGAACGC CGTTAGCCGA AAAAATGCGC GAACTAGTAA AGCAAGGACA TCCTGATGAG 
CCATTAACGG ACATGGCCGA GTTATTACTA TTGTATGCAG CACGAGCTCA GTTAGTTGGT 
AATGTTATTA AACCAGCTTT AGCCGCAGGT AATTGGGTGG TTGGTGATCG TCATGATCTG 
TCATCTCAGG CTTATCAAGG CGGTGGTCGT GGTTTTGACC GTGAGTTAAT GGCGACCATG 
AAAAGAACAG TACTTGGTGA TTTTACACCA GACTTAACTA TCTATATGGA TATTGATCCG 
AAGTTAGGGT TACAGCGTGC TTCTGCTCGT GGTGAGCTAG ATAGAATCGA ACAAATGAAA 
CTGGATTTCT TTGAACGCAG TCGTGAACGT TATTTAGAAT TTGCTAATAA TGACGAAAGT 
ATTATAACCA TTGATGCAGG ACAAGACTTA GATACGGTAA CAGCATCGAT TATTGCCGCT 
TTAGAAATAT GGTTAGCGAC GAATGGCAAC TAA 

 

Protein sequence

MSKFIVIEGL EGAGKSTAIK NVLATLAKHG ITAPVTTREP GGTPLAEKMR ELVKQGHPDE 
PLTDMAELLL LYAARAQLVG NVIKPALAAG NWVVGDRHDL SSQAYQGGGR GFDRELMATM 
KRTVLGDFTP DLTIYMDIDP KLGLQRASAR GELDRIEQMK LDFFERSRER YLEFANNDES 
IITIDAGQDL DTVTASIIAA LEIWLATNGN