| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2239 |
|---|
| Symbol | fabH |
|---|
| ID | 6988989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2409256 |
|---|
| End bp | 2410209 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380521 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_002263604 |
|---|
| Protein GI | 209695675 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000795975 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGCA AAATTTTAGG CACTGGTAGC TATTTACCAG CACAAGTTCG CACTAACGCG
GACTTAGAAA AAATGGTCGA TACTAGTGAT GAGTGGATTC TAGCTCGTAC AGGTATTAGT
GAGCGTCGTA TTGCTGGTGA AGGCGAATCA GTTGCTACTA TGGGGCATCT TGCTTCTGTT
AAAGCAATTG AAATGGCTGG AATTGATAAG AATGATATTG ATCTGATTAT CCTAGCTACA
AGTACGCCAA CGTATTCATT TCCGTCTTCC GCATGTGAAG TTCAAGGGTT ATTAGAGATC
CAAGGCTGCC CAGCTTTTGA TCTATCTGCC GCTTGTTCTG GTTTTGTTTA TGCTTTAAGT
GTTGCAGACC AACATATTAA AACAGGCATG GCAAAGAATG TTTTAGTGAT CGGCTCTGAT
GCTGTATCAC ACACATGTGA TCCTACCGAT CGTTCTACCG TTATCTTATT TGGTGATGGT
GCGGGTGCGG TTGTTGTTGG TCAAAGTGAA GAGCCTGGAA TTATTTCTAC TCATCTTCAT
GCTGATGGTA AATTTGGTGA GTTGCTTTCA TTGCCAGTTC CTTCACGTCG TAATGAAGAA
GCTGATAAGT GGTTGTACAT GGCCGGTAAT GAAGTGTTCA AAGTTGCCGT TACGCAGCTT
TCTAATTTGG TGAAGGAAAC CCTTCATAAA AACCAAATGG ACAAATCGGA ACTTGATTGG
TTAGTACCAC ACCAAGCTAA TTTACGAATT ATTAAAGCAA CCGCAAAAAA GCTGTCGATG
TCAATGGATC AAGTTGTTGT TACTTTAGAT CGTCATGGTA ATACTTCAGC AGCGACAGTT
CCGACTGCGT TAGATGAAGC AGTACGTGAC GGCCGAATCA AACGAGGCCA AACCTTATTG
CTTGAAGCAT TCGGTGGTGG CTTTACGTGG GGCTCTGCGC TCGTTAAATT TTAG
|
|---|
| Protein sequence | MYSKILGTGS YLPAQVRTNA DLEKMVDTSD EWILARTGIS ERRIAGEGES VATMGHLASV
KAIEMAGIDK NDIDLIILAT STPTYSFPSS ACEVQGLLEI QGCPAFDLSA ACSGFVYALS
VADQHIKTGM AKNVLVIGSD AVSHTCDPTD RSTVILFGDG AGAVVVGQSE EPGIISTHLH
ADGKFGELLS LPVPSRRNEE ADKWLYMAGN EVFKVAVTQL SNLVKETLHK NQMDKSELDW
LVPHQANLRI IKATAKKLSM SMDQVVVTLD RHGNTSAATV PTALDEAVRD GRIKRGQTLL
LEAFGGGFTW GSALVKF
|
|---|
| |