Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2229 |
Symbol | |
ID | 6989355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2396081 |
End bp | 2398240 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643380511 |
Product | putative outer membrane assembly protein |
Protein accession | YP_002263594 |
Protein GI | 209695665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.87964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGG CCGTGAAGAA AATAGTCTTA TTAATTAGCA TTCCGTTTAT TGCAATTGTT ATCGCATTAT TAGTGCTGGT ATTAGTTGTT AACCCTAATC AATTCAAACC ATTAATTAAA GAACAAGTAG AGCAGCAAAC TGGTCGTCAA CTGACTATGG ATGGTGATAT CTCTTGGCGT TTCTTCCCTT CTATTGGTTT TTCAATCGGT AATATGGCAT TAAGCAATCC AACTGGGTTT GCTACGGCTA ATTTAGTGAA ATTTGATAAT GCCAATATAG ACATCAATGT GCTTCCATTG TTTGATCACG AGATTAATAT TGGATTGATT ACGTTAGATG GGGCTGCTTT TACACTACAT ACATTAAAAA GTGGTGTAAC AAATCTTGAT GGCATCGGTC CTAAGGAAGA GATTTCAGTT GCTGAAAATA AAACTGAAAT AAAGAATGAA GACGTTACGA CTAGTGATAA TTTAAACGCC GAAGCTGCAA CTACAGCGCC TGAAATTAAT AGTTGGACCG TCAGTTTAGA GGGGATTGCA TTAACTAATG CGAGTGCGCT TATTCAAGAT GACAAAGCGG GCACAAAAAC GCAATTGTCT AATATGAATA TCAAGCTATC ACAATTCAGT CCTGGAGAAT GGACGCACTT AACGTTTGAT TTGAAGGCAG ATCTTGGTCA ACAGAAAATA GCTCTGAAGG GAGAAACGGA CCTTAATATT GCTAAGACGT TAGATACCGC ATCATTAAAA GAAACTGAAT TAGTTGTTTC TTATGCGGAT AAGACGAATA AGTTTGATGG TATTACATTA AGGATAGATA AATTTAATTT TGATGAATGG TCAACTCTCG AATTAGTGGC GGCGGGTAAA GCGAATGATA TGACTGTAGA TTCAAAATCA ACGTTTGAAT TGAACGTCCC AAAAGCACTC GATATTATTA AAATACGTAA ATTTATAAGT ACAAACAATG TAATAGGTGA TGCACTTCCA AATAAAGACG TCACTGCCAT TATTGGTTTT AATAGTTCTT TTGATGTCAC TAAATCATTA TTACAAGTCA CTGATTTAAC GCTTTCTGCG GTAGATACTC AATTTGATGG AAAGGCGAGT GTTGAGCTTA AGGGCATTCC TAAAGTGAGG TTTGAGTTAC ATAGCCCTAG CATAGATGTT GATGCTTTAT TAGCGACGTT GCCATCATCA AAGAATACAG TAGTTGATAA TAAACAAACG AATACGAGTA ATGTTAAAAA ATCCACACCA GTGAAAGAAA TTGAACCAGA CTTAAATGCA TTAAAAGGAT TGGATGTTGC GGGTAAGATT ACCATTGATC GTTTTAAAGC AAATAATGCA AAAATGCAAA ATGTACAATC GCAATTTTCT GTGAATCGTG GAGTATTGAA TTTATCTAAA TTTCATTCAA CTCTTTATGA TGGCAGCATT GATATGACAG CTAAATTAGA TGCTCGTAAG TCAATACCCG TATATAGCAT GAAAAACACC ATTAAAGGAG TTAAAGTTGC GCCTTTATTG ATAGATGTTA TGGGCGAGAG TTTAGTTGAA GGTACTGGTA ATATTACGAT AAATGTATCT GGAAAAAGTT TAAAACCGAC GGCATTAAAG CAAAATGTTA AAGGTAAAGT AGCTATTAAT TTTGCCGATG GTGCCGTGAA TGGAATTAAC GTTCCCCTTA TGATTCGAAC CACTTATGCA AAAGTTAAAG GTGAGAAAAT TAAAGGCAGT GATGAAGCTG AAAAAACAGA TTTTAGTGCA TTAACCGCAA GTTTCTTATT AGAAAACGGA AATGCCACTA CAAATAATAT TCGTATGGTA TCTCCATTAT TACGTATTCA TGGGGAAGGT TCTGCACAGT ACGTGAATAA AACGGCGAAT ATGCTTATTG AAACGTCGAT TGTAGGTTCA TTAAAAGGAC AGGGTGGCAA GAGTATCGAT GATTTGAAAG ACGTTACTAT TCCTATTCGT ATTACAGGTT CTTGGGCTAA CCCTAAATAT AAGCTTGAAT TTGGTGATGT AATGCAACAG AAAGCCAAAA AAGAACTTGA TCGCGGTATT GAGAAATTAG AAGCAAAATA CGGCGATAAA ATTAAAGATG AAAAAGTAAA AGATGCAGCA AATAAATTGC TAAAAGGATT ATTTAACTAG
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Protein sequence | MDLAVKKIVL LISIPFIAIV IALLVLVLVV NPNQFKPLIK EQVEQQTGRQ LTMDGDISWR FFPSIGFSIG NMALSNPTGF ATANLVKFDN ANIDINVLPL FDHEINIGLI TLDGAAFTLH TLKSGVTNLD GIGPKEEISV AENKTEIKNE DVTTSDNLNA EAATTAPEIN SWTVSLEGIA LTNASALIQD DKAGTKTQLS NMNIKLSQFS PGEWTHLTFD LKADLGQQKI ALKGETDLNI AKTLDTASLK ETELVVSYAD KTNKFDGITL RIDKFNFDEW STLELVAAGK ANDMTVDSKS TFELNVPKAL DIIKIRKFIS TNNVIGDALP NKDVTAIIGF NSSFDVTKSL LQVTDLTLSA VDTQFDGKAS VELKGIPKVR FELHSPSIDV DALLATLPSS KNTVVDNKQT NTSNVKKSTP VKEIEPDLNA LKGLDVAGKI TIDRFKANNA KMQNVQSQFS VNRGVLNLSK FHSTLYDGSI DMTAKLDARK SIPVYSMKNT IKGVKVAPLL IDVMGESLVE GTGNITINVS GKSLKPTALK QNVKGKVAIN FADGAVNGIN VPLMIRTTYA KVKGEKIKGS DEAEKTDFSA LTASFLLENG NATTNNIRMV SPLLRIHGEG SAQYVNKTAN MLIETSIVGS LKGQGGKSID DLKDVTIPIR ITGSWANPKY KLEFGDVMQQ KAKKELDRGI EKLEAKYGDK IKDEKVKDAA NKLLKGLFN
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