| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2205 |
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| Symbol | icd |
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| ID | 6989112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2369130 |
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| End bp | 2371358 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380487 |
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| Product | isocitrate dehydrogenase [NADP] |
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| Protein accession | YP_002263571 |
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| Protein GI | 209695642 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC AAAAATCTAA GATTATCTAT ACCATCACTG ATGAAGCGCC AGCATTGGCG
ACGCATTCAC TTCTTCCAAT TATTCAAGCA TTTGCAGCAT CATCTAACGT TGATGTTGAT
ACTCGCGACA TCTCACTTGC GGGTCGTGTC ATTGCAAATT TTTCTGAATA CCTAACAGAA
GACCAACGTA TTAGTGATGC ATTGGTAGAG CTTGGCGAAC TCGCTAAAAC GCCTGAAGCA
AACATCATTA AACTTCCGAA CATCAGTGCG TCGATTCCTC AACTTCATGC GGTAATTAAA
GAGCTTCAAG CGAAAGGCTA TGCTCTGCCT AATTACCCTG AAGAAGCAAA AACGGACGAA
GAAAAAACCG TTAAAGCGGT TTACGATAAA ATTAAAGGCT CAGCAGTTAA CCCTGTCCTT
CGTGAAGGTA ACTCTGATCG TCGTGCACCG GGTGCGGTTA AGCAATACGC GCGTAATAAC
CCACACTCAA TGGGTGCGTG GGCGAAGGAT TCAAAATCAC ATGTTGCAAG CATGAGTGAA
GGTGACTTCT ACGCAAGCGA AAAATCAGTG ACGATTGACG GTGCAACAAA CGTTAATATT
GAATTTGTTG CTGATAATGG CGATGTAACA GTACTGAAAG AAGGACTGGC ACTGAAAGAC
AAAGAAATCA TTGATGGTTC TTGTCTAAGC AAAAAAGCAT TGGTTGAATT CTTCGAAGCT
GAAATTAAAA AAGCCAAAGA AGAAGATGTT CTGCTTTCAC TGCATATGAA AGCGACGATG
ATGAAAGTCT CTGATCCAGT TATTTTTGGT CACGCGGTTA AAGTATTCTA TAAAGAAGTC
TTTGATAAAT ACGCGACGAC ATTTGCAAAA CTTGGTGTTG ATGCAAATAA TGGTGTTGGT
GATGTTTATA CTAAAATAGT ATCGCTTCCT GATGCTGAAA AAGCCGCGAT TGAAGCGGAT
TTAGCGGCGG TTTATGAATA CCAACCAGAG CTTGCAATGG TTGATTCAGA TCGTGGTATC
ACGAATCTTC ATGTACCAAG TGATGTAATC ATTGATGCTT CTATGCCTGC TGCATTACGT
ACTTCTGGTC GTATGTGGGG ACCAGATGGT CAACTAAAAG ATACGAAAGC AATGATCCCA
GATCGTTGTT ATGCCGGTGT GTACCAATCG GTTATTGAAT TCTGTAAAGT AAATGGCGCG
TTTGATCCAA CAACGATGGG CTCTGTGCCA AACGTAGGAT TAATGGCTCA AAAAGCAGAG
GAATATGGCT CTCATGATAA GACCTTCATT CTTCCTGCTG CGGGTACCGT TCGAGTGGTT
GATGCGACAG GCACCGCACT GATTGAACAT TCCGTTGGTG AAGGCGATAT TTGGCGTATG
TGTCAGGCAA AAGACGCTCC GATCCAAGAT TGGGTTAAAT TAGCGGTAAA CCGTGCTCGT
GCAACAGGAA CTCCGGCTAT TTTCTGGCTT GATACTAATC GCCAACATGA TGCTGAACTG
ATTAAGAAAG TAAATACTTA CCTTGCCGAT CATGATACAT CAGGTCTTGA TATTCAAATT
TTGTCTCCAG TTGCGGCGAC TGAATTTACG CTAGCGCGTA TTATTAAAGG CGAAGATACG
ATCTCGGTAA CGGGTAATGT ATTACGTGAT TATCTAACGG ATTTATTCCC TATTCTAGAG
CTAGGTACAT CAGCGAAAAT GCTGTCTATT GTTCCTCTTA TGAATGGTGG TGGTCTGTTT
GAAACGGGGG CGGGTGGTTC TGCACCAAAA CATGTTCAAC AATTCGAAAA AGAAAACCAT
TTACGTTGGG ATTCTTTAGG TGAATTCTTA GCATTAGCAG CGTCGTTTGA ACACTTAAGT
GTGACGACTG GCAATGCAAA AGCACAAATA CTTGCTGATA CACTTGATGC TGCAACGTCT
AAATTCCTTG AAACGAATAA ATCGCCATCA CGTCGTGTCG GTGAGTTGGA TAACCGTGGT
AGCCATTTCT ATCTAGCAAT GTATTGGGCT CAAGAACTTG CAGCGCAAAC GGGTGATGCA
GAACTTCAAG CCTATTTTGG TTCATTGGCT GAAACACTAA CGTCAAATGA AGCTAAAATA
GTTGAAGAGT TAAATGCAGC GCAAGGTGTT GTTGGCAATG TTGGGGGGTA CTTCCAACCG
ATTGCTGAAC TTGCTGCAAA AGAAATGCGT CCAAGTGCAA CGTTGAATGC GGCATTAGCG
ACTTTATAG
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| Protein sequence | MTTQKSKIIY TITDEAPALA THSLLPIIQA FAASSNVDVD TRDISLAGRV IANFSEYLTE
DQRISDALVE LGELAKTPEA NIIKLPNISA SIPQLHAVIK ELQAKGYALP NYPEEAKTDE
EKTVKAVYDK IKGSAVNPVL REGNSDRRAP GAVKQYARNN PHSMGAWAKD SKSHVASMSE
GDFYASEKSV TIDGATNVNI EFVADNGDVT VLKEGLALKD KEIIDGSCLS KKALVEFFEA
EIKKAKEEDV LLSLHMKATM MKVSDPVIFG HAVKVFYKEV FDKYATTFAK LGVDANNGVG
DVYTKIVSLP DAEKAAIEAD LAAVYEYQPE LAMVDSDRGI TNLHVPSDVI IDASMPAALR
TSGRMWGPDG QLKDTKAMIP DRCYAGVYQS VIEFCKVNGA FDPTTMGSVP NVGLMAQKAE
EYGSHDKTFI LPAAGTVRVV DATGTALIEH SVGEGDIWRM CQAKDAPIQD WVKLAVNRAR
ATGTPAIFWL DTNRQHDAEL IKKVNTYLAD HDTSGLDIQI LSPVAATEFT LARIIKGEDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQFEKENH
LRWDSLGEFL ALAASFEHLS VTTGNAKAQI LADTLDAATS KFLETNKSPS RRVGELDNRG
SHFYLAMYWA QELAAQTGDA ELQAYFGSLA ETLTSNEAKI VEELNAAQGV VGNVGGYFQP
IAELAAKEMR PSATLNAALA TL
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