| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2197 |
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| Symbol | mnmA |
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| ID | 6987654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2360856 |
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| End bp | 2361980 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380479 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002263563 |
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| Protein GI | 209695634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGACA ACAGCCAAAA GAAAGTCATC GTCGGAATGT CCGGTGGTGT AGACTCTTCA
GTATCAGCCT ACCTACTTCA GCAACAAGGA TACCAAGTTG AAGGTCTTTT CATGAAAAAC
TGGGAAGAAG ACGACAACGA GGAATATTGT ACCGCAGCTG AAGATTTAGC CGATGCACAA
GCCGTGTGTG ACAAATTAGG TATTCACCTT CATACCATTA ATTTCGCAGC TGAATATTGG
GACAACGTCT TTGAATATTT CCTAGAGGAA TACAAAGCGG GTCGCACGCC AAATCCAGAC
ATTCTTTGTA ATAAAGAAAT TAAATTTAAA GCATTCTTAG AGTTTGCTGA TGAAGTGTTG
GATGCCGATT TTATTGCAAT GGGTCACTAC GTTCGTCGTA CTTTCCCAAC CGCAGAAGAC
ATCGCAAATG GTGCTAAACC ACAAATGCTT CGTGGTTTGG ATTCAAACAA AGATCAAAGT
TACTTTCTAT ATACATTAAG CTCAGAGCAA GTTGCACGCA GCCTGTTCCC TGTTGGTGAT
CTAGAAAAAC CAGAAGTACG TCGCATTGCC CAAGAGCAAG ATTTGATCAC AGCGAAGAAA
AAAGATTCTA CTGGTATTTG CTTCATCGGT GAGCGTAAAT TCACTGAGTT CTTAGGCAAA
TACCTACCAG CACAACCAGG TAATATTGAA ACGCCAGAAG GCAAAGTTAT TGGTCAACAC
CAAGGCTTGA TGTACCACAC TCTAGGCCAA CGTAAAGGTT TGCACATTGG CGGTTCTAAA
GGCGGCGGCG GTAACGAAGA CCCATGGTTT GTTGGTGAAA AAGATTTAAA ACGCAATGTA
CTTATTGCTG TACAAGGTCA TGACCACCCA TTATTGAAAT CACAAGGCTT ATTAGCCTCT
CAACTTGATT GGGTTGATCG CACGGCGATC AAAGCACCAT TGAGCTGTAC GGTAAAAACA
CGTTACCGTC AAACTGATAT CCCTTGTACC ATTATCCCTA TCGATGATGA GAACATTAAG
GTGATTTTTA ATGAACCACA AATTGCGGTG ACTCCAGGTC AATCTGCTGT TTTCTACTCA
GGTGAAATTT GCCTAGGTGG CGGTATCATC GAAGAACGTA TTTAA
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| Protein sequence | MSDNSQKKVI VGMSGGVDSS VSAYLLQQQG YQVEGLFMKN WEEDDNEEYC TAAEDLADAQ
AVCDKLGIHL HTINFAAEYW DNVFEYFLEE YKAGRTPNPD ILCNKEIKFK AFLEFADEVL
DADFIAMGHY VRRTFPTAED IANGAKPQML RGLDSNKDQS YFLYTLSSEQ VARSLFPVGD
LEKPEVRRIA QEQDLITAKK KDSTGICFIG ERKFTEFLGK YLPAQPGNIE TPEGKVIGQH
QGLMYHTLGQ RKGLHIGGSK GGGGNEDPWF VGEKDLKRNV LIAVQGHDHP LLKSQGLLAS
QLDWVDRTAI KAPLSCTVKT RYRQTDIPCT IIPIDDENIK VIFNEPQIAV TPGQSAVFYS
GEICLGGGII EERI
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