| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2187 |
|---|
| Symbol | |
|---|
| ID | 6987646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2349468 |
|---|
| End bp | 2349938 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643380469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263553 |
|---|
| Protein GI | 209695624 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAG CAACAAAATT ATTAAAGAAA TTAAAAATAG ATCATCAGGT GCTTGAGTAT
CATCATGATT CTAAAGCGCA AGCTTATGGA CTTGAAGCGG CTGAAAAGTT GGGTTTACCT
CATGAAGAGG TGTTTAAAAC GCTGGTTGTA CAAGTGGATG AAAAAGATCT GGTTGTTGGC
ATTATTCCAG TGGCAAAGCA ATTAAGCATG AAATTAATTG CTAAAGCCGT TAAAGGCAAA
AAAGCCAAAA TGGCGGATCC AGCATTAGTA CAAAAAAGCA GTGGTTATGT GATGGGAGGA
GTGAGTCCTC TTGGTCAAAA GAAGCGTTTG AAAACGGTGA TTGATATCAG TGCTGAAGAA
TTTAAAACCA TGTACGTGAG TGGTGGAAAA AGAGGACTTG ATATTGGATT GTCGCCACAA
GATTTACAAC ATACATTGGT CGCTCAATTT GCCGATATTA CGTCAGAATA A
|
|---|
| Protein sequence | MTPATKLLKK LKIDHQVLEY HHDSKAQAYG LEAAEKLGLP HEEVFKTLVV QVDEKDLVVG
IIPVAKQLSM KLIAKAVKGK KAKMADPALV QKSSGYVMGG VSPLGQKKRL KTVIDISAEE
FKTMYVSGGK RGLDIGLSPQ DLQHTLVAQF ADITSE
|
|---|
| |