Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2181 |
Symbol | rrmA |
ID | 6987642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2342095 |
End bp | 2342904 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380464 |
Product | 23S rRNA methyltransferase A |
Protein accession | YP_002263548 |
Protein GI | 209695619 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTATC AATGCCCTTT ATGCCAGCAC GAATTACACG TTACGCATAA TCAATATCGC TGTGAAAATA ATCATCAATT TGATAATGCA AAAGAAGGGT ATGTGAATCT CATGCCTGCA CATCATAAAC GCTCGAAGAA CCCGGGTGAT AATAAAGAGA TGATGCAAGC AAGACGTGCT TTTTTAGAAG CAGGACATTA CCAACCTATG CAACAGCTGG TTGCTGATTT TTGTCAAACC TACCTTACTG ATGAATCATC TACCTTATTA GATATCGGTT GTGGTGAAGG TTATTACACT GCCGAAATTC AGAACCGCCT TGTAGAAAGA CGCGCTCAAG TATTTGGACT AGACATATCA AAAGTAGCGA TTAAATTTGC CGCAAAACGT TATCCAAACT GTCAATTTAG CGTGGCATCG AGCCATCGTT TGCCTTTCTC TGATCAAAGT TTAAATGGCA TTGTTCGCAT TTATGCGCCA TGCAAAGCCG AAGAGTTACA ACGTACGATT AAAGACGAGG GTTATTTGTT TACTGTAACC CCTGCAAGTC ATCACTTATT TGAGCTACGT GAAGAAGTTT ATGGTGAAGT ACGCTTACAC GATGAAGCCG CTGAGGAAAT TGAAGGCTTT GAATTGGTAA AAGAAGAAAA GCTTACTTAC GATATGTCAT TAACGGGCAT TGAAGCATTA CATTTACTGG ATATGACGCC TTTTTCATGG AAAGCCACAC CTGAATTTAA ACATGATTTA GCAAATAAAA CATCGTTCAT CTGTAAAGCT GATTTCATGA TAAGAGCTTA TAAAAAATAA
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Protein sequence | MSYQCPLCQH ELHVTHNQYR CENNHQFDNA KEGYVNLMPA HHKRSKNPGD NKEMMQARRA FLEAGHYQPM QQLVADFCQT YLTDESSTLL DIGCGEGYYT AEIQNRLVER RAQVFGLDIS KVAIKFAAKR YPNCQFSVAS SHRLPFSDQS LNGIVRIYAP CKAEELQRTI KDEGYLFTVT PASHHLFELR EEVYGEVRLH DEAAEEIEGF ELVKEEKLTY DMSLTGIEAL HLLDMTPFSW KATPEFKHDL ANKTSFICKA DFMIRAYKK
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