| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2151 |
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| Symbol | |
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| ID | 6987620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2308657 |
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| End bp | 2309217 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380437 |
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| Product | membrane protein |
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| Protein accession | YP_002263521 |
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| Protein GI | 209695592 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.899411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA ATCAAGGATT TACCTTAATT GAACTGATCG TTGTTATCGT TATTTTAGGT
ATTCTAGCGG TCACCGCTGC GCCTAAATTT TTGAACTTAC AAGATGATGC ACATGAATCG
AGGGCGAATG GCGTGTTCTC AGCTTTCACT GCTGCTGTCA ATATGTATCA CGGCGCATGG
GTTTTGCAAG GTGAACCGTC TGTAAGTTCT GGTGTCGGTG TTATTTTTTC AGACGAGACC
ATTTACCCAT CAAAGGAAGG TTTTCCTTTA AAAACGGAAC AAAACTCACC TGGGCAGATT
ACTGGTGAAG GCTGTGGTCA ACTTTGGAAT GCATTATTAA ATCAAGATTT AACTATTGAA
AAATATGCAG GTGATGGTTT TGTAAGCACT AGTGCTGATA TCCAATATTG GTATGGGTCA
CCTATTTCAG GTAAACCACA AGCATGTATG TATTACTATA CATCAGATAT AACAAACAAA
AGCCAACAAG GTTACCAACT AAATTACTTC CCCTCTACAG GGGAGACGAT AACTAAAAGC
TATAATAAAG GAACTAAGTG A
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| Protein sequence | MKNNQGFTLI ELIVVIVILG ILAVTAAPKF LNLQDDAHES RANGVFSAFT AAVNMYHGAW
VLQGEPSVSS GVGVIFSDET IYPSKEGFPL KTEQNSPGQI TGEGCGQLWN ALLNQDLTIE
KYAGDGFVST SADIQYWYGS PISGKPQACM YYYTSDITNK SQQGYQLNYF PSTGETITKS
YNKGTK
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