Gene VSAL_I2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2146 
Symbol 
ID6987617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2303350 
End bp2304102 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content40% 
IMG OID643380432 
Productputative MltA-interacting protein MipA 
Protein accessionYP_002263516 
Protein GI209695587 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0292974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAT TAGTCAGTGG TTTCATCCTA GGAGCAGTAT TGCTCGTAAC CAATAGTGTA 
AATGCAAAAA TATCTCAATG GTCTATTGGT GCTGCAGCAG CATATTCCCC CTCTTTTTAT
AAAGAAACAC CATCAAATAC AACGGTAATA CCAATGATTG GTTATGAGGG AGAGCATATA
TTTTTGCGTG GATTCAATGG TGGTTATCGT TTATATCCTA TTGGCTCACC TCAAAATATT
ATCTTTCGTT TTGTATATGA TCCTCGAACA TTTCAACCAG AAGATTCTAA AAATGCAGAG
ATGCAGCAAT TAGATGAACG AAAAAGTACG GTGCTAGGTG GGGTTAGCTA TCAAATAATT
ACTCATATAG GGATCATTGA GTTCACCGGA GGGACTGATA TTGGTAGAGC GCATAATGGA
TTATATGCAG AAGCAGCATG GCGTTTACCG ATTAGAGGGA AAGGATGGGC CGTAACCCCA
TCTTTTGGTT ATTCATATAA TAGCCAACGG TTAAACAATC ACCTTTATGG GGTATCAGCT
GAAGAAGCCC AGAGAAGCGG TATTGAAGAG TTTGATGCTG ATTGGGATGG CCAATTTTTT
ATTGGATTAT CGACTTATTT CCACGTAACC CCAAATATAA GAGTGACGGG GGGCTTACGA
TATGTGAACC TTGAAGGGAA TTTAGAGCAA AGTCCGATGA TAGAGCACAC AACCAGCTCT
ACGGGTAATG TTGGTATAGC ATACGTATTC TAA
 
Protein sequence
MNKLVSGFIL GAVLLVTNSV NAKISQWSIG AAAAYSPSFY KETPSNTTVI PMIGYEGEHI 
FLRGFNGGYR LYPIGSPQNI IFRFVYDPRT FQPEDSKNAE MQQLDERKST VLGGVSYQII
THIGIIEFTG GTDIGRAHNG LYAEAAWRLP IRGKGWAVTP SFGYSYNSQR LNNHLYGVSA
EEAQRSGIEE FDADWDGQFF IGLSTYFHVT PNIRVTGGLR YVNLEGNLEQ SPMIEHTTSS
TGNVGIAYVF