Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2146 |
Symbol | |
ID | 6987617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2303350 |
End bp | 2304102 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380432 |
Product | putative MltA-interacting protein MipA |
Protein accession | YP_002263516 |
Protein GI | 209695587 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0292974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAAAT TAGTCAGTGG TTTCATCCTA GGAGCAGTAT TGCTCGTAAC CAATAGTGTA AATGCAAAAA TATCTCAATG GTCTATTGGT GCTGCAGCAG CATATTCCCC CTCTTTTTAT AAAGAAACAC CATCAAATAC AACGGTAATA CCAATGATTG GTTATGAGGG AGAGCATATA TTTTTGCGTG GATTCAATGG TGGTTATCGT TTATATCCTA TTGGCTCACC TCAAAATATT ATCTTTCGTT TTGTATATGA TCCTCGAACA TTTCAACCAG AAGATTCTAA AAATGCAGAG ATGCAGCAAT TAGATGAACG AAAAAGTACG GTGCTAGGTG GGGTTAGCTA TCAAATAATT ACTCATATAG GGATCATTGA GTTCACCGGA GGGACTGATA TTGGTAGAGC GCATAATGGA TTATATGCAG AAGCAGCATG GCGTTTACCG ATTAGAGGGA AAGGATGGGC CGTAACCCCA TCTTTTGGTT ATTCATATAA TAGCCAACGG TTAAACAATC ACCTTTATGG GGTATCAGCT GAAGAAGCCC AGAGAAGCGG TATTGAAGAG TTTGATGCTG ATTGGGATGG CCAATTTTTT ATTGGATTAT CGACTTATTT CCACGTAACC CCAAATATAA GAGTGACGGG GGGCTTACGA TATGTGAACC TTGAAGGGAA TTTAGAGCAA AGTCCGATGA TAGAGCACAC AACCAGCTCT ACGGGTAATG TTGGTATAGC ATACGTATTC TAA
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Protein sequence | MNKLVSGFIL GAVLLVTNSV NAKISQWSIG AAAAYSPSFY KETPSNTTVI PMIGYEGEHI FLRGFNGGYR LYPIGSPQNI IFRFVYDPRT FQPEDSKNAE MQQLDERKST VLGGVSYQII THIGIIEFTG GTDIGRAHNG LYAEAAWRLP IRGKGWAVTP SFGYSYNSQR LNNHLYGVSA EEAQRSGIEE FDADWDGQFF IGLSTYFHVT PNIRVTGGLR YVNLEGNLEQ SPMIEHTTSS TGNVGIAYVF
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