Gene VSAL_I2139 details

Gene Information

• Locus tag: VSAL_I2139
• Symbol: pgsA
• ID: 6988161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2294246
• End bp: 2294800
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643380425
• Product: cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferas (phosphatidylglycerophosphate synthase)
• Protein accession: YP_002263509
• Protein GI: 209695580
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00838588
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTAA CGATACCAAA TATACTCACG TTTATCCGAC TTGCACTTAT TCCAGTGTTT 
GTTGTTGTTT TCTATTTACC TTATGAATGG TCTGCAGTTG CTGCTGCGAT GGTTTTTTGG 
GTAGCAGGCT TTACTGATTG GTTGGATGGG TTACTAGCAA GAAAGCTAGG ACAAACCTCT 
CGATTTGGTG CCTTTTTAGA TCCTGTAGCA GATAAAGTAA TAGTTGCTGC GGCCTTAATT 
TTAATTACCG AACATTATCA TAGTATTTGG ATCACAATTC CTGCGATTAC CATGATAGGG 
CGTGAACTGA TTATTTCTGC TTTAAGAGAA TGGATGGCAG AAATAGGTAA ACGTGCAAGT 
GTTGCTGTTT CTTGGGTTGG AAAAGTTAAA ACCGTTTCTC AAATGTTCGC ATTGTGGGTT 
TTAATTTGGC GTTATGATGA TTGGATGGTG TGGGTTGGTT ATGTTGCACT TTATGTAGCC 
ACCATACTAA CGTACTGGTC AATGATGCAA TATCTTGCTG CAGCGAAAGA TGATCTACTT 
AATGCTGATG ATTAG 

 

Protein sequence

MRLTIPNILT FIRLALIPVF VVVFYLPYEW SAVAAAMVFW VAGFTDWLDG LLARKLGQTS 
RFGAFLDPVA DKVIVAAALI LITEHYHSIW ITIPAITMIG RELIISALRE WMAEIGKRAS 
VAVSWVGKVK TVSQMFALWV LIWRYDDWMV WVGYVALYVA TILTYWSMMQ YLAAAKDDLL 
NADD