Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2031 |
Symbol | hexR |
ID | 6988628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2177492 |
End bp | 2178346 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380321 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | YP_002263410 |
Protein GI | 209695481 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0294963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCA TTGAAAAAAT ACAAAATAAT CTAGATAACT TTAGTAAATC AGAACGTAAA GTTGCTGAAG TTATAATGGC ATCACCACAA ACTGCAATTC ATTCAAGTAT CGCAACCTTA GCTAAAATGG CCGATGTTAG TGAGCCTACG GTTAACCGTT TTTGTCGCCG TCTTGATACT AAAGGGTTTC CTGATTTTAA ACTTCACCTT GCTCAAAGTC TGGCAAACGG CACACCTTAT GTAAATCGCA ATGTTGAAGA ACATGATGGA CCAGATGCGT ATACTCATAA GATTTTTGAA TCGACAATGG CATGCCTTGA TGTTGCTAAA AACAGTCTTG ATCCAATGCA AATTAACCGT GCTGTAGATT TGTTAACTCA AGCAAAGAAA ATTTCATTCT TTGGCTTAGG CGCTTCAGCA TCCGTTGCTC ATGATGCCAT GAATAAATTC TTCCGTTTTA ACATTCCAAT CACTTGCTTT GATGACATTG TAATGCAACG CATGAGCTGT ATTAATAGTA CAGAAAATGA TGTCGTTGTT CTTATTTCTC ATACTGGTCG TACAAAGAGC TTGGTAGAAA TCGCAGAGCT GGCAAGATCA AATGGTGCAA CCGTTATCGC CATTACTGCG AAAGAATCGC CATTAGAAAA AATGTCTTCT CTAGCGATTT GTTTAGACGT TCCTGAAGAC ACTGACGTTT ATATGCCAAT GGCCAGCCGT GTAGTGCAAA TGACGGTCAT TGATGTTCTA GCTACTGGCT TTACACTCCG CCGCGGTGCA GGATTTAGAG ATAATTTAAA ACGCGTTAAA GAAGCACTTA AAGACTCACG CTTTGAAAAA GAAAACCACT ATTAA
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Protein sequence | MNTIEKIQNN LDNFSKSERK VAEVIMASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT KGFPDFKLHL AQSLANGTPY VNRNVEEHDG PDAYTHKIFE STMACLDVAK NSLDPMQINR AVDLLTQAKK ISFFGLGASA SVAHDAMNKF FRFNIPITCF DDIVMQRMSC INSTENDVVV LISHTGRTKS LVEIAELARS NGATVIAITA KESPLEKMSS LAICLDVPED TDVYMPMASR VVQMTVIDVL ATGFTLRRGA GFRDNLKRVK EALKDSRFEK ENHY
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