| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2029 |
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| Symbol | |
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| ID | 6987525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2175149 |
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| End bp | 2176831 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380319 |
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| Product | hypothetical protein |
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| Protein accession | YP_002263408 |
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| Protein GI | 209695479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0129834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACATTG ATGTTGCGAC CTTGTTATCG CAAAACGATA TCTTACTTTT ATTCGTTGTT
CTCGCTCTAG GCTTATTTAT AGCTAAAGTT AAAATCGGTA GCTTCCAATT AGGCAGTTCT
ATCGGTGTTC TTATCACTGC CCTCTTTATG GGTAGTCTCG GATATACCTT CACCGCAGAT
TCACTCAATA TTGGCTTTAT GCTATTTATT TTTTGTGTTG GTATTGAGGC TGGTCCAAAC
TTCTTCGGTA TTTTCCTTCG TGATGGTAAG CACTACTTAT TACTTGTATT AGTCGTGTTA
ATTTCAGCAA TTTCCCTTAG TTTCTTGACT GGTTATTACT TTAATCTCGA TTATGGCCTA
TCGACAGGAA TGATGGCTGG AGCATTAACA GCAACGCCGG TATTGGTTGG TGCAAAAGAT
GCCTTAAATT CTGGTTTAGC CGTACTCCCT GAAGGTGTTG ATTTCAGTAA AGTAATGGAT
AATCTCAGTG TCGGTTATGC CTTCTCGTAT TTGATTGGCT TAACCAGCTT AATTTTATTG
GCTCGATTAC TACCACAATT GCAGAAGCAA AACCTACAAG ACAGTGCGAT GCAAATAGCT
CAAGAACGTG GGATCGGTAG CGCAGGACAA AGAAAAGTCT ATTTACCAAT CATTCGAGCA
TATCGTGTAG GCCAAGAGCT TATTGACTGG ACTGATGGAA AAAACTTACG TGAACTTGGC
ATCCACCGTC AAACTGGTTG TCATATCGAG CGTATTCGTC GTAACGGTAT TCTGGCGAAT
CCAGATGGTG ATTATATCCT ACAACAAGGA GATGAAATTG CGCTTGTGGG TTACCCTGAT
AGCCATGCTC GTCTTGATTC AAGCTTTAGA AACGGTAAAG AAGTATTTGA CCGTAACTTG
CTTGATTTAC GTATTGCCGA GGAAGAGATT GTTGTAAAAA ATGACAACAT CGCAGGCAAA
CGTTTATCCG AATTAAACTT ATCTGAATAT GGCTGCTTCT TGAACCGTGT AGTACGAGCT
CAAATTGAAA TGCCAATTGA ACACGATATT GTTTTAGCGA AAGGAGACAT CCTTCAAGTC
AGTGGCGAGA AAAGCAAGGT TCACCATATT GCGGATAAAA TTGGTTTCAT CTCAATCCAC
AGTCAGGTAT CCGATTTATT AGCTTTCTGT AGCTTCTTTA TTCTTGGCAT TATGTTTGGC
ATGATCACGA TGAGCTTTGG CCAAGTAACC TTTGGACTAG GCAACGCAGT CGGCTTATTG
ATCTCAGGCA TCACCTTAGG CTTTTTAAGA GCCAACCACC CAACCTTTGG TTACGTGCCT
CAAGGCGCAC TTAATATGAC CAAAAACCTA GGGCTTTTAG TCTTTATGGT AGGAATTGGA
CTGAGTGCCG GTGGCAACAT TATTGAATAT TTCTCGGAAG ATGGTCTTAA AGTATTAGCC
GCTGCACTTA TTGTAAGTGT GATTCCGGTG ATCCTTGCTT ATCTTGTTGG TGCTTATATT
TTAAAAATGA ACCGTGCACT ATTAATCGGA GCGATTATTG GCGCTCGAAC TTGTGGTCCT
GCGATGGATG TAGTGAATGA ACATGCCCGC AGTACGATTC CTGCACTTGG TTATGCTGGT
ACTTATGCTA TTGCCAATAT CTTAATGACC GTTGCTGGTA CTATTATGAT TTTGTTAGCC
TAA
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| Protein sequence | MNIDVATLLS QNDILLLFVV LALGLFIAKV KIGSFQLGSS IGVLITALFM GSLGYTFTAD
SLNIGFMLFI FCVGIEAGPN FFGIFLRDGK HYLLLVLVVL ISAISLSFLT GYYFNLDYGL
STGMMAGALT ATPVLVGAKD ALNSGLAVLP EGVDFSKVMD NLSVGYAFSY LIGLTSLILL
ARLLPQLQKQ NLQDSAMQIA QERGIGSAGQ RKVYLPIIRA YRVGQELIDW TDGKNLRELG
IHRQTGCHIE RIRRNGILAN PDGDYILQQG DEIALVGYPD SHARLDSSFR NGKEVFDRNL
LDLRIAEEEI VVKNDNIAGK RLSELNLSEY GCFLNRVVRA QIEMPIEHDI VLAKGDILQV
SGEKSKVHHI ADKIGFISIH SQVSDLLAFC SFFILGIMFG MITMSFGQVT FGLGNAVGLL
ISGITLGFLR ANHPTFGYVP QGALNMTKNL GLLVFMVGIG LSAGGNIIEY FSEDGLKVLA
AALIVSVIPV ILAYLVGAYI LKMNRALLIG AIIGARTCGP AMDVVNEHAR STIPALGYAG
TYAIANILMT VAGTIMILLA
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