| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2024 |
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| Symbol | |
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| ID | 6987521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2166942 |
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| End bp | 2169395 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380314 |
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| Product | predicted permease |
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| Protein accession | YP_002263403 |
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| Protein GI | 209695474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTC CGGTAGTTAG GGCACTTTTA GGGCACTACC GTCGCCACCC ATTACAAATA
TTTTTAGTAT GGCTTGGTTT AACACTTGGC GTATCGCTTC TTGTGGGTGT ATTAGCCATT
AATCACCATG CAAAGATAAG CTATAGCGAA GGCGAGAAAC TCTTTTCTAA TCCTTTTCCT
AATCGTATTC GCTCTATTCA AGAAAACATC ACGATTCCTC AAGCGTTCTA TATTAATTTA
CGTCGAGCGG GCTACACCTC CTGTATGCCG GTTCAAACTC AGCATTTAGA AACAACCAAT
GATATTGATA TCTCGTTGGT TGGTATTGAT CCTGTCGCAT TAATGCAGAT TTCAAAAAAT
AGCGTAGCAA GCAATGAGAA TTTGTTGTCG TTAATGCGTC CGCCGTTTCC TGTTCTTATT
AGCCAACCTT TAGCGTCTTA TTTTAGCTTA AGTGATGGCG ATTATATTGA ACTTGAAAAT
CAAGCTAATC TTGGTCCTGT CATCGTTGAT AAATTTAATC GACTTTCTGG ATCTCGACTT
TTTTCTGATA TTTCATTAAC TCGAATGCTG GGTCATAAGG CAGGTTTTGA TGTTTTACTG
TGCGGTGAAA TGTCCGAAAA AGAAGCCGAT AGATTAGAAC GAATGCTACC AAGAGGGTTG
CAGCTCGATA CACATAAAGA ATCTGGTTTA ACCGCATTAA CAAAAGCATT TCATACCAAC
CTATTTGCGA TGGGTATGCT TTCTTTTGTT GTTGGTTTAT TTATTTTTTA CCAAGCAATG
TCGCTTTCTT TTATTCAACG TCAGCCTTTA GTTGGAACAT TAAGACAAAT TGGCGTATCA
ACAAAAGAGT TGATATTTGC GATGAGTGCC GAGGTGATGT TGTGGGTACT TATTGGTTGG
TTAAGCGGTA ATTTCTTTGG GGTATTGCTT GCTAATGAGT TAATGCCTAC GGTTTCTAAT
AGCTTATATT CACTCTACAA CGCGGATGTT GATTTGCTAA TTACGTGGAG TTGGAGCTGG
AGTTATCAAA GCTTATGGAT GGCGATTCTT GGCTGTATTT TAGCGTGTGG TTGGCCGTTA
TACCGCTTGC TTAGTATCGA ACCTATTCGA TTAACTGCTC GTTTATCATT GGTTCGTTTT
GCAGGGAAAG AATTTGAAGT TCAGGCCATT ATTGCCTGCG TATTTTGTGT TGCAGCGTAT
TTAATTCATT TATTGCCTCA TAGCCATGAG TATGGATTTA TTCTTATTGG TTTCTTAATG
GTGGGGGTTG GATTATTGAC TCCATTTATT ATTTTAAAAT TATTTGATTG GCTTTCTTAC
AAATTACCGT CGCCTAAAGC GCGATGGTTT TTTGCCGATT CGTCTGCAAG TTTAAGTTAT
CGAGGCGTCG CTGCGATGGC ATTTATGTTA GCCCTTGCGT CTAATATTGG TGTTGAAACG
ATGGTGGGTA GCTTTAGGGC AACGACTAAC GATTGGCTTG AACAACGCTT AGCTGCCGAT
ATTTATATAC AACCGAGTAA GGCTTCTGCG AGTCGAATTA CTTATTGGCT AGAGAAACAA
CCAGAAGTTG AAGAAGTATG GCGTCAATGG AAAATTGATT ATCAGACCGA GTATGGCAAT
TTAGAGATTT TAAGTACAGG TTCATCGCCT GGTGAGAAAA ATGCATTAAC CATGAAAGTG
GCCATTCCTG AATATTGGGA TTCATTACAC CACTCTCGCA GTTTGCTGAT TAGTGAATCA
ATGGCTCTGA AATGGGATTT AAAACCGGGA GATTACTTGG ATCTACCGGC TCCGGTTGGT
GACAATTGGC AAATATCTGG GGTTTATTAT GATTATGGAA ATCAGTACAA CCAGTTAATG
CTTACGCACA ATGCTTGGCT AAAGGCCTTT GGTGGGCAAG GAACCACCGG TATTGGTGTT
GTGCTTACTG ATGAAAGCAA ACGAACTCAA TTGATTGGCC GAGTGCTTAA AAAATACAGA
TTACCAGTCG AACAAGTCGT TGATAATAAC AATATTCAAA CACAAGCGAT GAAGGTGTTT
GATCGGACTT TTATCGTAAC GGGAACCTTA GGTAATTTAA CGTTAGTTAT TGCTGTGTTT
GGTCTGTTTT TTGCTACTTT AGTCGGGGAA ACCTCTCGTC AGCGGCAAAC GGCGTTGTTA
CGTTGCTTGG GCCTTTCAGG CAAAGAACTC ATTATGCTCG GTGGATTGCA ATTATTGGCT
ATTGGATTGT TGACGATTTT AATTGCGTTG CCTCTTGGCA TTCTCTTATC TCAATTACTC
ATTGATATCG TAATGAAATA TGCATTTGGT TGGACGATGG AAATTAATTA TTTCCCTATG
GAATATTTAG CTACTTTTGG ATGGGCTTTG CTTGCTCTAA CGGTTGCAGG TTCGGCAACG
GTATGGCGAG TGACTAGACG ACAAGCGATT ACGTCTTTAA GAGAGTCTTT ATAA
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| Protein sequence | MSFPVVRALL GHYRRHPLQI FLVWLGLTLG VSLLVGVLAI NHHAKISYSE GEKLFSNPFP
NRIRSIQENI TIPQAFYINL RRAGYTSCMP VQTQHLETTN DIDISLVGID PVALMQISKN
SVASNENLLS LMRPPFPVLI SQPLASYFSL SDGDYIELEN QANLGPVIVD KFNRLSGSRL
FSDISLTRML GHKAGFDVLL CGEMSEKEAD RLERMLPRGL QLDTHKESGL TALTKAFHTN
LFAMGMLSFV VGLFIFYQAM SLSFIQRQPL VGTLRQIGVS TKELIFAMSA EVMLWVLIGW
LSGNFFGVLL ANELMPTVSN SLYSLYNADV DLLITWSWSW SYQSLWMAIL GCILACGWPL
YRLLSIEPIR LTARLSLVRF AGKEFEVQAI IACVFCVAAY LIHLLPHSHE YGFILIGFLM
VGVGLLTPFI ILKLFDWLSY KLPSPKARWF FADSSASLSY RGVAAMAFML ALASNIGVET
MVGSFRATTN DWLEQRLAAD IYIQPSKASA SRITYWLEKQ PEVEEVWRQW KIDYQTEYGN
LEILSTGSSP GEKNALTMKV AIPEYWDSLH HSRSLLISES MALKWDLKPG DYLDLPAPVG
DNWQISGVYY DYGNQYNQLM LTHNAWLKAF GGQGTTGIGV VLTDESKRTQ LIGRVLKKYR
LPVEQVVDNN NIQTQAMKVF DRTFIVTGTL GNLTLVIAVF GLFFATLVGE TSRQRQTALL
RCLGLSGKEL IMLGGLQLLA IGLLTILIAL PLGILLSQLL IDIVMKYAFG WTMEINYFPM
EYLATFGWAL LALTVAGSAT VWRVTRRQAI TSLRESL
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