| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2019 |
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| Symbol | bcr |
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| ID | 6989214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2161267 |
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| End bp | 2162472 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380310 |
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| Product | bicyclomycin/multidrug efflux system |
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| Protein accession | YP_002263399 |
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| Protein GI | 209695470 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.11668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCT CAGCTAGCGA TCTTTCTGAA GCCCCTAAGT TAAGTCTTTT ATTAGTCATC
ATTTTGGGTG CTATTTCAGC GCTAACACCA CTTGCTATTG ATATGTATGT TCCTGCAATG
CCGAGCATTG CGGCGGATCT TGGTGTATCT GCGGGTTCAG TTCAGATGAC ATTAACAGCT
TATACGGCCG GCTTTGCGAT TGCACAACTG ATTCATGGGC CACTGGCTGA CAGTTATGGT
CGCCGTCCGG TATTAATTAT TGGTACGGTG CTCTTTGCCA TTTGTGCGGT GATTGGTGCA
CAGGTTGATG GTATTGAATC ATTAATGTAT ATCCGTGTTT TACAAGGGAT TGCAGGAGCG
GCATCAGCGG TGGTTATTCA AGCTATTGTT CGTGACATGT TTAATAAAGA AGATTTTGCC
CGCATGATGT CTTTCATCAC GTTGGTCATG ACAATTGCCC CACTGGTCGC GCCGATGATT
GGTGGACACA TGGCGGTATG GTTCGGTTGG CGTTCAATTT TTTGGTTACT GGCTATTTTT
GCCGTGTTAA CTATTTTTGC AATTCTTTGG CGGATCCCTG AAACGTTGGC AGAAGAGAAT
CGCTCTCCTT TTAGATTAAT GACGTCGTTT AGAAATTACC GTTCATTATT TAAAAACCCA
GTGTCACTTG GTTTGATTTT CTCTGGTGCT TTTTCTTTTG CTGGGATGTT TTCATTTTTA
ACGGCAGGCT CATTTGTTTA CATCGATATT TATGGTGTGA GCGTGTCTAA TTTTGGTTAT
TTATTTGGTT TAAACGTTGT TTTCTTAATT GTTATGACCG CGATTAACGG TCGTATGGTT
AAAAAAATGG GTTCCCATAA TATGATTAAG TTCGGCCTTT CTATTCAACT GTTTGCTGGC
ATTCTGATGA TGGTCGGGCA ACTATTAAAC TGGGGTCTAT GGGGAACGGT TATTCCTGTT
GTATTGTTTG TGGGTTGTAT CTCGACGATT GGCAGTAATA CGATGGGCTT ATTGTTAAGC
CACTACCCTA AAATGGCGGG AACCGCATCA TCATTAGCGG GCACATTGAG ATTTGGTACG
GGGTCACTTG TTGGCGCTTG TATTGCAATG TTTCCTGCTG ATTCTGCTTG GCCTATGGTG
AGTTCCATGG CAGCATGTTC TATCTTATCT TTTGGTTGTT ATTTTGTTTT TGGACGTAAA
GCGTAA
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| Protein sequence | MSSSASDLSE APKLSLLLVI ILGAISALTP LAIDMYVPAM PSIAADLGVS AGSVQMTLTA
YTAGFAIAQL IHGPLADSYG RRPVLIIGTV LFAICAVIGA QVDGIESLMY IRVLQGIAGA
ASAVVIQAIV RDMFNKEDFA RMMSFITLVM TIAPLVAPMI GGHMAVWFGW RSIFWLLAIF
AVLTIFAILW RIPETLAEEN RSPFRLMTSF RNYRSLFKNP VSLGLIFSGA FSFAGMFSFL
TAGSFVYIDI YGVSVSNFGY LFGLNVVFLI VMTAINGRMV KKMGSHNMIK FGLSIQLFAG
ILMMVGQLLN WGLWGTVIPV VLFVGCISTI GSNTMGLLLS HYPKMAGTAS SLAGTLRFGT
GSLVGACIAM FPADSAWPMV SSMAACSILS FGCYFVFGRK A
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