| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2017 |
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| Symbol | |
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| ID | 6987517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2158722 |
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| End bp | 2160326 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380308 |
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| Product | MFS transporter |
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| Protein accession | YP_002263397 |
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| Protein GI | 209695468 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.775296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG AATTAACAGC CACAAATCAA AATGACGTAG CGGATACACC GATAGAGCCT
GAAATCCCAA GACGTCATTG GATAGCTCTG TTCGGTGGCT TGCTTGGTGC GTTTATGGCG
ATTCTGGATA TTCAGATCAC CAACTCTTCA CTAAAAGACA TTCAAGGGGC GTTATCGGCC
ACCATGGATG AAAGTTCATG GATCTCTACC TCATACCTTG TGGCTGAAAT GATCGCTATC
CCATTAAGTG GTTGGCTATC GGTCGCGATT GGTAAGCGTC GTTATTTAAC GTGGACCACC
ATTATTTTTG CTGTGGCGTC AGTCTTATGC TCACTCTCTT GGAGCATGGG ATCGATGATC
GTCTTTCGTG CGATCCAAGG CTTCAGTGGT GGCGCATTAA TTCCTTTGGC GTTTTCTCTT
GTTGTTCAAT TATTACCATT GAATAAACGA GCGGTTGGTA TGGCTCTCTT TGGTGTGACA
GCAACATTTG CACCATCAAT CGGGCCAACA TTGGGTGGCT GGTTAACGGA AAACTTTTCT
TGGCATTATA TTTTCTATAT TAATATTCCC CCTGCGATAG CACTTATTTT TATGGTGAAT
TATGGTCTTG ATGATGAACC GCTACGATTA GACAGTTTGC TGAAAGCCGA TTGGTTTGGC
ATCGCGACCA TGGCGATAGG GTTGGGTTGT TTAGAAGTGG TTTTAGAAGA AGGGAATAGA
GAAGAGTGGT TCAGTTCTAG TTTCATTATT ACGTTGTCGA TTATCTCTGC CATTAGCTTA
ATTTATTTTG TGATTAACGA GTTACAGCAT AAAAACCCGT TAGTAAATTT GCGGCTACTT
AAACAAAGTC AGTTTGCGAT GTCGTGTGTC GCCTATTTAA TTTTAGGGAT GGCGTTATTG
GGGTCTATTT ACGTGTTGCC TATGTATATG ATCCAAATTC AGGGTTATAA CTCGTTAGAA
ATTGGTGAAG TATTAATGTG GATGGGGTTT CCTCAGTTAT TAATTTTCCC ATTGGTCCCT
AAATTAACTC AGATTATTAA AGCTAAATAT CTCGTGTTTT TTGGTTTTGC AATGTTCGGT
ATTAGCTGCT TTGTAAACAC ACACATGAGT TATGATTTTG GTGGCGATCA ATTGATTTTC
TCTATGCTGC TGCGTGCTAT TGGTAGCCCA TTTATTATGG TGCCGCTGTC TTTAGTTGCG
ATGGAAGAGA TTCAAAAACA TCAAGTGGCC GATGCCTCAA CGATTACCAA TGTACTGCGT
AACTTGGGTG GTGCGTTTAG TATTGCGTTT ATTGCGACGC TGTTGGATAA CAAAACCCGC
GAACATTTGG GTCATATCAA AGAAACCTTA ACTACGGTAA GTACAGATGG GTGGTATCAC
TTGCAACAGA GTGCGGCGAT GTTTGTCTCA AAGGGGAGTG ATCCGGCAAC GGCGATGCTG
CAAGCTAAAG CGTCATTGAG TCTGACAATG CAAAGAGACG CGGCAATTAT GGCGTACAAC
GATGTGTTTT TCATGATGAC ATGTTTCTTA GGTTTTGCTG CATTTATGAT GTTTTTTGTT
AAATCGAATT CGAATCCAGG GTCAATCGAG GCTGGAGGGC ATTAA
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| Protein sequence | MTQELTATNQ NDVADTPIEP EIPRRHWIAL FGGLLGAFMA ILDIQITNSS LKDIQGALSA
TMDESSWIST SYLVAEMIAI PLSGWLSVAI GKRRYLTWTT IIFAVASVLC SLSWSMGSMI
VFRAIQGFSG GALIPLAFSL VVQLLPLNKR AVGMALFGVT ATFAPSIGPT LGGWLTENFS
WHYIFYINIP PAIALIFMVN YGLDDEPLRL DSLLKADWFG IATMAIGLGC LEVVLEEGNR
EEWFSSSFII TLSIISAISL IYFVINELQH KNPLVNLRLL KQSQFAMSCV AYLILGMALL
GSIYVLPMYM IQIQGYNSLE IGEVLMWMGF PQLLIFPLVP KLTQIIKAKY LVFFGFAMFG
ISCFVNTHMS YDFGGDQLIF SMLLRAIGSP FIMVPLSLVA MEEIQKHQVA DASTITNVLR
NLGGAFSIAF IATLLDNKTR EHLGHIKETL TTVSTDGWYH LQQSAAMFVS KGSDPATAML
QAKASLSLTM QRDAAIMAYN DVFFMMTCFL GFAAFMMFFV KSNSNPGSIE AGGH
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