| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2007 |
|---|
| Symbol | |
|---|
| ID | 6987507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2148918 |
|---|
| End bp | 2149679 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643380304 |
|---|
| Product | phosphatidylglycerophosphatase B |
|---|
| Protein accession | YP_002263393 |
|---|
| Protein GI | 209695464 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.993627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTA ATTTTATGAA ACAATTTACT ATGTTATTTT CATTTTCACC TAAAAACCGT
ATTTACGAAC TCGTTGCTTT CTTTCTGTTT ATTGCAGCGA TGCTGTTGGT TATTTTGATT
ATTCCAACAC CCAATTTATT TGACCCAATG TCAGAGATAG CAAATAGTCT TCTTAGCTTG
TTAAGTCGTT CTGCCGGTCA TCCTCTTTTT ATCGTCACTT CGGCAATACT TTGTTGCTTA
CCTATTATTA AGCGCATGCC TTTCAAGAAG ATATTGTCCC TCTATCTTCA ATTTGCCATC
TTATTAGTAC TTAGCTTAAT ACTTAAAACC AGTGTTAAAG CCATCACTGA GATCCCTCGT
CCTTTTACTC AAGCATTAAC ACAAGTCAGT GTCGTTGAAA GCCCTGATGC GTTTTACTTA
TTAAAAGAAC AAGATAAACA AGATATGATC TCAATGGTTG AAACGCTTGT TAGCCCAGCT
CGTATTGATC AATGGCGTCA AGGTACGAAT TATTCATTCC CATCGGGTCA TACTATTTTT
GCCGCTATCT GTGTTTTATT CTGGGGTGGC TTTTTACTTC GTCATAAGCA CTATGTACTA
ACTGCGGCAG TGATCAGCTG GGGAGTTGGT GTCGGTTTAA GTCGCTTATG GCTTGGAATG
CATTGGCCAA CAGATCTCAT GGCGTCCATC ATCAGCGCAT CGATTTTGAT TCTTTGTGTG
CCAACAATAA ATTTAGAAAA AGAACCCATC GACAAAAACT AA
|
|---|
| Protein sequence | MTLNFMKQFT MLFSFSPKNR IYELVAFFLF IAAMLLVILI IPTPNLFDPM SEIANSLLSL
LSRSAGHPLF IVTSAILCCL PIIKRMPFKK ILSLYLQFAI LLVLSLILKT SVKAITEIPR
PFTQALTQVS VVESPDAFYL LKEQDKQDMI SMVETLVSPA RIDQWRQGTN YSFPSGHTIF
AAICVLFWGG FLLRHKHYVL TAAVISWGVG VGLSRLWLGM HWPTDLMASI ISASILILCV
PTINLEKEPI DKN
|
|---|
| |