| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2005 |
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| Symbol | dcuA |
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| ID | 6987506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2146411 |
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| End bp | 2147712 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380302 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_002263391 |
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| Protein GI | 209695462 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.560683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGATAA TTATCGAAAT ATCTGTTGTT TTAATCTGTA TATACTGGGG CTTAAAAATG
GGAGGCCTTG GTGTTGGTTT AGCGGGTGGA CTTGGGCTCG CGATACTCAC TCTTGGATTA
GGTCTTGAAC CTAGTGCTCC TGCTATCGAT GTTATTTTGA TCATCATGTC AGTAGTAACA
GCAGCATCAA CAATGCAAGC GGCCGGAGGT ATGGATTGGT TGGTGCATCA TGCCGGAAAC
TTAATGCGCC GCCACCCAAA ATATATCAAC GTATTAGCGC CTATGATCAC TTGGTGTATG
ACGATTATGG CTGGTACTGG TTACACTGTT TTTTCTACAC TTCCTGTTAT AGCAGAGGTT
GCAAAAGAGA TAGGGGAACG TCCATCAAGA CCACTGTCAG CTGCAGTTGT TGCATCCCAA
GTTGCTATTT CTGGCTCACC AATTTCAGCA GCAATGGCCG CTATGATTTC AATAATGGAA
CCTGCTGGCG TTAGTTTTTT ACAAATAATG GCGATTTGTT TACCTGCCTC TTTTATTGCC
GCAATGGTTG CTGCTTTTGT TGCTTCTCGC CAAGGCTGTG AGTTAAAAGA TGATGTGATA
TATCAACAAA TTCAAAAAAA TAACAAGCAA CAAACAACGA AAAAATCAGA AGCTATCGAT
CCAAAAGCAA AATATTCGGT CATCTTCTTT GCATTAGCAA CGTGTGCCAT TGTTATTTAT
GCGGCGATTC CATCACTTCG CCCCGCCTTT CCAAGTGGTA ATATTATGTC AACACGAGAC
ATCATTATTG TCAGTATGTT TGCAGCGGCC TGTTTGATGG TACCAATGTG TAACATTCAC
CCTGACCGCA TTATCCGTAC CACCACATTC CGTTCAGGCA TGAGCTCTGT TGCCGTGATA
TTAGGTATTG TGACTATGGG ATCAACCGTT GTTAATGCAC ACCTTCCTGA AATAAAAGAA
TTTGCAGGGT CTCTTCTTCA TTCTTATCCA ATGCTGTTAT CTCTTGTTCT TTTTGGTACT
TGTACGCTTC TAATGTCACA AGGAGCAACC ACTCCATTAA TTGTTCCGTT AGCACTGAGT
TTAAACGTTC CTCATTGGGC AATCTTGGCA TCATTTGTTG CCGTTACGGG TGTTTTTGTT
CTGCCTACTT ATCCTACATC TCTTGCTGCC ATTGAGTTTG ACTCAACAGG ATCTACACAC
ATGGGAAAAA ACATTTTCGA CCATCCATTC ATGCTACCCG GCTTAACAGG GGTGGTTGTC
GCCATTGGAT TCGGATTCTT ACTTGCTCCT ATCGTTCTTT AA
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| Protein sequence | MSIIIEISVV LICIYWGLKM GGLGVGLAGG LGLAILTLGL GLEPSAPAID VILIIMSVVT
AASTMQAAGG MDWLVHHAGN LMRRHPKYIN VLAPMITWCM TIMAGTGYTV FSTLPVIAEV
AKEIGERPSR PLSAAVVASQ VAISGSPISA AMAAMISIME PAGVSFLQIM AICLPASFIA
AMVAAFVASR QGCELKDDVI YQQIQKNNKQ QTTKKSEAID PKAKYSVIFF ALATCAIVIY
AAIPSLRPAF PSGNIMSTRD IIIVSMFAAA CLMVPMCNIH PDRIIRTTTF RSGMSSVAVI
LGIVTMGSTV VNAHLPEIKE FAGSLLHSYP MLLSLVLFGT CTLLMSQGAT TPLIVPLALS
LNVPHWAILA SFVAVTGVFV LPTYPTSLAA IEFDSTGSTH MGKNIFDHPF MLPGLTGVVV
AIGFGFLLAP IVL
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