Gene VSAL_I1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1995 
Symbol 
ID6987501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2136897 
End bp2137670 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content39% 
IMG OID643380292 
Productphospholipase A1 precursor 
Protein accessionYP_002263381 
Protein GI209695452 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGATGCTATT AATTGCATGG GCTCTACCCT TTATGACATC TGCAAAAGCG 
CTTAATCGTA TATCTGGTTA TGAAGACAGC TATTTATTAG GAAGTTACAC CGATAGTATC
AACAAAGATG AATACATTTC AGGAGGCTTT GAAGACGCTG ATGGCCTTCA AAATGTGGAA
GTGAAATTTC AGTTTTCTTT AGCGGTGCCG ATCGTTCAAA TTAATAACAG CACTTCATTC
ATGTTCTCTT ATACGCAAAA GTCGCTATGG CAACTAGGGA ATAGCGAGAT TTCATCGCCT
TTTAGAGAAA CGAACTATAA GCCTCAGTTT TTTGTTATGC ATCAATCAAA CATGCTGATT
TTTAATAGTG CAGAATTTGG TTATATGCAT GAATCAAATG GTCAAACATC GAGTTTATCA
CGCAGTTGGG ATCGTATTTA TACTGGATTA GAGCGTCTTG ATGGCCCAGT GCAATACGGT
GTTCGTGCAT GGTATGTGTT CAGCGACGAA GAAAACAATG AAGACATTAA TGATTTTATG
GCTCCTTATG ATGTGTGGCT AAAAGTCGGT AATGATATTG GTGAATTTTC TACACGATTC
CATTACAACT TTGCTACCGA TAAAGGTGGC GTAGAGGCGG CGTATACACT TTATGTAAAC
CAGTTTGTCG GTCTCTATGT ACAAGGTTGG ACGGGGTATG GTGAGACGCT GATTGATTAT
AATTATGATC ACAGTCGCAT TGGTATTGGT ATGAGATTAC TTCCACCAAA TTAA
 
Protein sequence
MKKWMLLIAW ALPFMTSAKA LNRISGYEDS YLLGSYTDSI NKDEYISGGF EDADGLQNVE 
VKFQFSLAVP IVQINNSTSF MFSYTQKSLW QLGNSEISSP FRETNYKPQF FVMHQSNMLI
FNSAEFGYMH ESNGQTSSLS RSWDRIYTGL ERLDGPVQYG VRAWYVFSDE ENNEDINDFM
APYDVWLKVG NDIGEFSTRF HYNFATDKGG VEAAYTLYVN QFVGLYVQGW TGYGETLIDY
NYDHSRIGIG MRLLPPN