Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1985 |
Symbol | torR |
ID | 6989311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2126867 |
End bp | 2127565 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380282 |
Product | DNA-binding transcriptional regulator TorR |
Protein accession | YP_002263373 |
Protein GI | 209695444 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.156357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATC ACATTTTAGT TGTTGAAGAC GAAGTGGTAA CTCGCTCTAA GCTTGTAGGC TATTTTGAAG CCGAGGGATA TCAAGTGAGC GAGGCTGAAA CGGGCGCAGA AATGCGAACT GTTTTGGCTG AACAAAAAGT TGATTTAATT ATGCTTGATA TAAACCTACC AGGAGAGGAT GGTTTATTAT TGGCGCGTGA ATTACGCAGC CAGTCTAATA TTGGTATTAT TTTAGTTACA GGACGAACTG ATAGTATTGA CCGCATCGTA GGTTTAGAGA TGGGTGCGGA TGATTACGTA ACAAAACCTG TGGAGTTACG TGAGCTTTTA GTCCGAGTTA AAAATCTATT TTGGCGTATG TCATTAGCAA ATGAACCCGT AGAATTAGAT GAATCAAATT TAATTCGTTT TGGGGAATGG ACGTTTGATA TTCAACGTCG TGCTTTATCG AACAATGGTG AGCCAGTTAA GTTAACGAAA GCCGAATATG AGCTATTAGT TGCTTTGTCG TCTTATCCGA ACACGGTATT ATCACGTGAA CGTATTTTAA ATATGATTAG CCACCGTGTT GATGCGCCAA ATGACAGAAT GATTGATGTT TTGATCAGGC GAATGCGTGC CAAAATGGAA GTGGATCCAA AAAATCCTCA AATATTTGTT ACTGTTCATG GCGAAGGGTA CATGTTTGCT GGTGATTGA
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Protein sequence | MSYHILVVED EVVTRSKLVG YFEAEGYQVS EAETGAEMRT VLAEQKVDLI MLDINLPGED GLLLARELRS QSNIGIILVT GRTDSIDRIV GLEMGADDYV TKPVELRELL VRVKNLFWRM SLANEPVELD ESNLIRFGEW TFDIQRRALS NNGEPVKLTK AEYELLVALS SYPNTVLSRE RILNMISHRV DAPNDRMIDV LIRRMRAKME VDPKNPQIFV TVHGEGYMFA GD
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