Gene VSAL_I1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1972 
Symbol 
ID6987483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2113990 
End bp2114901 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content39% 
IMG OID643380269 
Productperiplasmic solute binding protein 
Protein accessionYP_002263360 
Protein GI209695431 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATA CATTGTTCAC AATACCAGTA TTAGCCCTCA CTCTAGGGCT TAGCCACTCA 
GCCATCGCGT CAGAGCAAAT GCCAGTGATC ACTAGCTTTT CTATTTTAGG CGATATCGTA
TCTCAAATAG GAGGAGACCA TATTGCGATA ACTAATCTAG TCAAAGCCAA TGGGGATGCC
CATGTTTATC AACCAACCCC TATTGATGCA AAAGAAATTT CACAGGCGAA ATTAGTCATT
ATGAATGGCT TGGGATTTGA AGGTTGGATG CCTCGTTTAA TCGAATCCTC CAATTTTAAA
GGAATCGAAA TCATTGCATC AAATGGAATA ACGCCGTTAA CAAGGGAGGA GGAAGATCAT
CATCATGAAA CTGATCATCA ACATGGAAAC TACGACCCAC ATGCATGGAA CAGTGTTAAA
AATGTGAAAA TTTACGTTAA AAATATAGAA GCGGGATTAA TCAAAGCGGA CCCTAAAAAC
AGCAATGATT ATAAGAGAAA TGCAGATAAT TATTTACAAA AACTGGATAA GCTAGAGATC
ACCATTCATC AAGAATTGGA TCAAATACCA CAATCCAAAA GAACCATAAT CACACCGCAT
GATGCATTTG GTTATTTTTC TCGCGATTAC AATGTCACGT TCTATGCACC TCAAGGAACA
AGTACCGAAT CGGAAGCCAG CGCTGCGGAT GTTGCAACCA TAATTCGACA AATAAGAAAG
GACGATATCC AAGCCGTCTT TATCGAAAAT ATTACTGATA ACAGAATGAT CGAACAAATA
AGTAACGAAA CACACGCTCA CATTGGTGGA AAGCTGTATT CAGATGCACT TTCAGGCCCC
GATGAGCCCG CAACAAGCTA TATAAAACTA ATGCAGCACA ATGTAAATAC CATTACTCAA
GCCCTAAAAT AA
 
Protein sequence
MSNTLFTIPV LALTLGLSHS AIASEQMPVI TSFSILGDIV SQIGGDHIAI TNLVKANGDA 
HVYQPTPIDA KEISQAKLVI MNGLGFEGWM PRLIESSNFK GIEIIASNGI TPLTREEEDH
HHETDHQHGN YDPHAWNSVK NVKIYVKNIE AGLIKADPKN SNDYKRNADN YLQKLDKLEI
TIHQELDQIP QSKRTIITPH DAFGYFSRDY NVTFYAPQGT STESEASAAD VATIIRQIRK
DDIQAVFIEN ITDNRMIEQI SNETHAHIGG KLYSDALSGP DEPATSYIKL MQHNVNTITQ
ALK