Gene VSAL_I1899 details

Gene Information

• Locus tag: VSAL_I1899
• Symbol: pal
• ID: 6989304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2032865
• End bp: 2033422
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643380200
• Product: peptidoglycan-associated lipoprotein precursor
• Protein accession: YP_002263295
• Protein GI: 209695366
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.640623
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACTAA ATAAACTTCT TAAGAGTCTT TTAATCGCGC TGCCAGTGGT TGCTCTTTCT 
GCTTGTAGTT CTAGCGATAG CGCAACTGAT AGTACTGCTG GTCAAGAATC AACAAACGGA 
ACAGAAACAA CAAGCGGTAC TGCTGGTGAA GGCCAAACAG ATACAACGGT TGTTACTGTA 
GTTGAAGGTG AAGAAGTTCT AACTGAGCAA GAAGTTAAAG AACAAGCTTT ACGTCAAGTT 
CAGACTGTTT ACTTCGCTTT TGATAACTCA ACTATTTCTT CAGAGTATGA AGATATGCTT 
GCAGCTCACG CGGCTTTCTT AAGCAAAGCG CCTGAAGTTA AAGTAACCGT TGAAGGCCAT 
GCTGACGAAC GTGGTACTCC TGAGTACAAC ATCGCACTAG GCGAACGTCG TGCTAATGCA 
GTTGCTAAAT ACCTACAAGC TTTAGGTGTT TCTGCAGACC AAATCTCTAT CGTAAGCTAC 
GGTGAAGAAA AACCTCTAGT TCTTGGCCAA ACAGCTGAAG ACTACGCTAA AAACCGTCGT 
GCAGTATTAG TATACTAA 

 

Protein sequence

MQLNKLLKSL LIALPVVALS ACSSSDSATD STAGQESTNG TETTSGTAGE GQTDTTVVTV 
VEGEEVLTEQ EVKEQALRQV QTVYFAFDNS TISSEYEDML AAHAAFLSKA PEVKVTVEGH 
ADERGTPEYN IALGERRANA VAKYLQALGV SADQISIVSY GEEKPLVLGQ TAEDYAKNRR 
AVLVY