Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1890 |
Symbol | cydA |
ID | 6989217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2025572 |
End bp | 2027161 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380191 |
Product | cytochrome d ubiquinol oxidase subunit I |
Protein accession | YP_002263286 |
Protein GI | 209695357 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTG ATGTAGTGGA GTTATCGCGG TTGCAGTTTG CAATGACAGC GATGTATCAC TTCCTATTCG TTCCTCTGAC TTTAGGTATG GCCTTTCTAT TGGCTATCAT GGAGTCGTTA TATGTAATGA CCAACAAACA AATCTACAAG GACATGACAA AGTTCTGGGG TAAGTTATTT GGTATTAACT TCGCATTAGG TGTAGCAACA GGCCTAACCA TGGAGTTCCA GTTTGGTACA AACTGGTCTT ACTATTCTCA CTATGTTGGT GATATTTTCG GTGCGCCTCT TGCGATCGAA GCACTGATGG CTTTCATGCT TGAATCTACT TTTGTAGGAC TATTTTTCTT TGGTTGGGAT CGTTTATCAA AACGTCAGCA TCTTACAGTA ACGTGGTTAG TTGCTTTAGG TTCGAATTTC TCAGCGCTTT GGATTCTAGT AGCAAACGGT TGGATGCAAA ACCCTGTCGG TGCTGAATTT AATTTTGAAA CGATGCGTAT GGAAATGGTT AGCTTCGCTG AAGTTGTACT AAACCCTGTC GCTCAAGTTA AATTCGTTCA TACCGTTGCT TCTGGTTACA CCGCTGGCGC AATGTTTGTT TTAGGTATTA GTTCATACTA CCTACTAAAA GGTCGTGATG TTGCCTTTGC TCGTCGTTCA TTCGCAATTG CTGCGTCTTT CGGCATGGCA TCAATTTTAT CTGTAATGGT ACTTGGTGAT GAATCTGGTT ATGAATTGGG TGAAGTTCAA CAAGTTAAGC TAGCAGCGAT TGAAGCTGAA TGGCATACAG AAGAAGCACC TGCGGCTTTC ACCGTATTTG GCTTACCAAA TCAAGAAACG ATGGAAACGG ATTATGCAAT TAAGATCCCT TATGTTATGG GTATTATTGC AACGCGTTCA TTAGATAAGC AAGTCACTGG CTTACGCGAT CTTAAAGCAC AGCACGAAGT TCGTATTCGT AACGGTATGA TCGCTTATGA CCTTCTTGAA AAATTACGTA ATGGTGATAA AACACCTGAA AATATAGCAG CATTTGATGA TGTTAAGCAT GACTTAGGTT ATGGCTTATT GCTTAAGCGT TATACTGATA AAGTTGTTGA TGCAACTGAA GATCAGATTA AAGCGGCAGC AGATGATTCT ATTCCAAATG TTTTACCATT ATTCTTCTCT TTCCGCATAA TGGTTGCTTG TGGCGTAGCA ATGCTACTTA TTTTTGGCCT TGCGTTTTAT CAAACGTGTC GTCAAAAAAT TGGTCAAAAA CCATGGTTAC TTAAAGCGGC ATTATTCGGT ATGCCACTGC CGTGGATCGC AATTGAAGCG GGTTGGTTTG TTGCAGAATA TGGTCGTCAG CCATGGGCAG TTGGTGAAAT ACTACCTGTA CATGTTGCCG CATCATCACT CACTGTTACT GAAGTTTTAA TTTCAATAGC TGCAATTATT AGCTTATATA CTATTTTCTT GATTGCTGAA GTTTACCTAA TGGTTAAATT CGCACGTAAA GGACCTAGTA GCTTGAAAAC TGGTCGCTAT CACTTTGAAC AAGACGGTCA AGGTTCTGAA GCAAAGTTAA CTCGCGAAGT AGAAGCATAA
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Protein sequence | MITDVVELSR LQFAMTAMYH FLFVPLTLGM AFLLAIMESL YVMTNKQIYK DMTKFWGKLF GINFALGVAT GLTMEFQFGT NWSYYSHYVG DIFGAPLAIE ALMAFMLEST FVGLFFFGWD RLSKRQHLTV TWLVALGSNF SALWILVANG WMQNPVGAEF NFETMRMEMV SFAEVVLNPV AQVKFVHTVA SGYTAGAMFV LGISSYYLLK GRDVAFARRS FAIAASFGMA SILSVMVLGD ESGYELGEVQ QVKLAAIEAE WHTEEAPAAF TVFGLPNQET METDYAIKIP YVMGIIATRS LDKQVTGLRD LKAQHEVRIR NGMIAYDLLE KLRNGDKTPE NIAAFDDVKH DLGYGLLLKR YTDKVVDATE DQIKAAADDS IPNVLPLFFS FRIMVACGVA MLLIFGLAFY QTCRQKIGQK PWLLKAALFG MPLPWIAIEA GWFVAEYGRQ PWAVGEILPV HVAASSLTVT EVLISIAAII SLYTIFLIAE VYLMVKFARK GPSSLKTGRY HFEQDGQGSE AKLTREVEA
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