Gene VSAL_I1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1890 
SymbolcydA 
ID6989217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2025572 
End bp2027161 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content40% 
IMG OID643380191 
Productcytochrome d ubiquinol oxidase subunit I 
Protein accessionYP_002263286 
Protein GI209695357 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTG ATGTAGTGGA GTTATCGCGG TTGCAGTTTG CAATGACAGC GATGTATCAC 
TTCCTATTCG TTCCTCTGAC TTTAGGTATG GCCTTTCTAT TGGCTATCAT GGAGTCGTTA
TATGTAATGA CCAACAAACA AATCTACAAG GACATGACAA AGTTCTGGGG TAAGTTATTT
GGTATTAACT TCGCATTAGG TGTAGCAACA GGCCTAACCA TGGAGTTCCA GTTTGGTACA
AACTGGTCTT ACTATTCTCA CTATGTTGGT GATATTTTCG GTGCGCCTCT TGCGATCGAA
GCACTGATGG CTTTCATGCT TGAATCTACT TTTGTAGGAC TATTTTTCTT TGGTTGGGAT
CGTTTATCAA AACGTCAGCA TCTTACAGTA ACGTGGTTAG TTGCTTTAGG TTCGAATTTC
TCAGCGCTTT GGATTCTAGT AGCAAACGGT TGGATGCAAA ACCCTGTCGG TGCTGAATTT
AATTTTGAAA CGATGCGTAT GGAAATGGTT AGCTTCGCTG AAGTTGTACT AAACCCTGTC
GCTCAAGTTA AATTCGTTCA TACCGTTGCT TCTGGTTACA CCGCTGGCGC AATGTTTGTT
TTAGGTATTA GTTCATACTA CCTACTAAAA GGTCGTGATG TTGCCTTTGC TCGTCGTTCA
TTCGCAATTG CTGCGTCTTT CGGCATGGCA TCAATTTTAT CTGTAATGGT ACTTGGTGAT
GAATCTGGTT ATGAATTGGG TGAAGTTCAA CAAGTTAAGC TAGCAGCGAT TGAAGCTGAA
TGGCATACAG AAGAAGCACC TGCGGCTTTC ACCGTATTTG GCTTACCAAA TCAAGAAACG
ATGGAAACGG ATTATGCAAT TAAGATCCCT TATGTTATGG GTATTATTGC AACGCGTTCA
TTAGATAAGC AAGTCACTGG CTTACGCGAT CTTAAAGCAC AGCACGAAGT TCGTATTCGT
AACGGTATGA TCGCTTATGA CCTTCTTGAA AAATTACGTA ATGGTGATAA AACACCTGAA
AATATAGCAG CATTTGATGA TGTTAAGCAT GACTTAGGTT ATGGCTTATT GCTTAAGCGT
TATACTGATA AAGTTGTTGA TGCAACTGAA GATCAGATTA AAGCGGCAGC AGATGATTCT
ATTCCAAATG TTTTACCATT ATTCTTCTCT TTCCGCATAA TGGTTGCTTG TGGCGTAGCA
ATGCTACTTA TTTTTGGCCT TGCGTTTTAT CAAACGTGTC GTCAAAAAAT TGGTCAAAAA
CCATGGTTAC TTAAAGCGGC ATTATTCGGT ATGCCACTGC CGTGGATCGC AATTGAAGCG
GGTTGGTTTG TTGCAGAATA TGGTCGTCAG CCATGGGCAG TTGGTGAAAT ACTACCTGTA
CATGTTGCCG CATCATCACT CACTGTTACT GAAGTTTTAA TTTCAATAGC TGCAATTATT
AGCTTATATA CTATTTTCTT GATTGCTGAA GTTTACCTAA TGGTTAAATT CGCACGTAAA
GGACCTAGTA GCTTGAAAAC TGGTCGCTAT CACTTTGAAC AAGACGGTCA AGGTTCTGAA
GCAAAGTTAA CTCGCGAAGT AGAAGCATAA
 
Protein sequence
MITDVVELSR LQFAMTAMYH FLFVPLTLGM AFLLAIMESL YVMTNKQIYK DMTKFWGKLF 
GINFALGVAT GLTMEFQFGT NWSYYSHYVG DIFGAPLAIE ALMAFMLEST FVGLFFFGWD
RLSKRQHLTV TWLVALGSNF SALWILVANG WMQNPVGAEF NFETMRMEMV SFAEVVLNPV
AQVKFVHTVA SGYTAGAMFV LGISSYYLLK GRDVAFARRS FAIAASFGMA SILSVMVLGD
ESGYELGEVQ QVKLAAIEAE WHTEEAPAAF TVFGLPNQET METDYAIKIP YVMGIIATRS
LDKQVTGLRD LKAQHEVRIR NGMIAYDLLE KLRNGDKTPE NIAAFDDVKH DLGYGLLLKR
YTDKVVDATE DQIKAAADDS IPNVLPLFFS FRIMVACGVA MLLIFGLAFY QTCRQKIGQK
PWLLKAALFG MPLPWIAIEA GWFVAEYGRQ PWAVGEILPV HVAASSLTVT EVLISIAAII
SLYTIFLIAE VYLMVKFARK GPSSLKTGRY HFEQDGQGSE AKLTREVEA