| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1889 |
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| Symbol | ruvB |
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| ID | 6989216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2024185 |
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| End bp | 2025198 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380190 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_002263285 |
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| Protein GI | 209695356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAG CCGATCGCCT TATTGCTGCT GATAACCCTG TTTTTCGTGA CGAAGAAGTC
ATCGATCGTG CGATACGTCC AAAGAAACTG GAAGATTATC GCGGACAAGA TCATGTTCGT
AGCCAAATGG AAATTTTCAT TAAGGCTGCG CAGATGAGAC AAGAGCCACT TGATCATCTA
CTAATTTTTG GTCCTCCAGG ATTAGGTAAG ACAACGTTAG CTAATATTGT TGCCAATGAA
ATGGGAGTGA GTATCCGAAC GACATCGGGT CCTGTTCTTG AGAAAGCGGG AGATTTAGCT
GCGCTTCTTA CTAATCTGGA AGAAAACGAT ATTTTATTTA TCGATGAAAT CCATCGATTA
AGTCCTGTAG TAGAAGAGAT ACTGTATCCT GCGATGGAAG ATTACCAATT AGATATTATG
ATTGGTGAAG GTCCTGCAGC TCGTTCAATC AAAATTGATT TGCCCCCATT TACATTAATT
GGTGCAACCA CCAGAGCCGG TTCTTTGACT TCTCCACTGC GTGACCGTTT TGGTATTGTT
CAACGATTAG AATATTACAA AGTAGACGAT TTGCAATATA TCGTTCAACG TAGTGCGGAT
TGTTTGAATT TGTCCATGGA ATCAGAGGGC GCATTGGAAG TGGCTCGACG TGCTCGTGGT
ACACCACGAA TTGCCAACCG ATTGTTACGT CGAGTTCGTG ATTATGCAGA TGTTATGAGT
GACAGTCATA TCTCACCAGA CATAGCAGAT AAGGCATTAA ACATGTTAGA TGTTGATGTG
TGTGGGTTTG ATTACATGGA TAGAAAGTTA TTATTGGCAA TCATGGAGAA ATTCAATGGT
GGTCCAGTGG GTCTAGATAA CGTAGCCGCT GCAATTGGTG AAGAAAAAGA TACGATTGAA
GATGTGATAG AACCTTATTT AATTCAACAA GGCTACCTTC AGAGAACACC AAGAGGGCGT
ATTGTGTCAG ATCGAGCCTA TCTTCATTTT GGTATTGATA GACCAGATAA ATAG
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| Protein sequence | MIEADRLIAA DNPVFRDEEV IDRAIRPKKL EDYRGQDHVR SQMEIFIKAA QMRQEPLDHL
LIFGPPGLGK TTLANIVANE MGVSIRTTSG PVLEKAGDLA ALLTNLEEND ILFIDEIHRL
SPVVEEILYP AMEDYQLDIM IGEGPAARSI KIDLPPFTLI GATTRAGSLT SPLRDRFGIV
QRLEYYKVDD LQYIVQRSAD CLNLSMESEG ALEVARRARG TPRIANRLLR RVRDYADVMS
DSHISPDIAD KALNMLDVDV CGFDYMDRKL LLAIMEKFNG GPVGLDNVAA AIGEEKDTIE
DVIEPYLIQQ GYLQRTPRGR IVSDRAYLHF GIDRPDK
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