Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1889 |
Symbol | ruvB |
ID | 6989216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2024185 |
End bp | 2025198 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380190 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_002263285 |
Protein GI | 209695356 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAG CCGATCGCCT TATTGCTGCT GATAACCCTG TTTTTCGTGA CGAAGAAGTC ATCGATCGTG CGATACGTCC AAAGAAACTG GAAGATTATC GCGGACAAGA TCATGTTCGT AGCCAAATGG AAATTTTCAT TAAGGCTGCG CAGATGAGAC AAGAGCCACT TGATCATCTA CTAATTTTTG GTCCTCCAGG ATTAGGTAAG ACAACGTTAG CTAATATTGT TGCCAATGAA ATGGGAGTGA GTATCCGAAC GACATCGGGT CCTGTTCTTG AGAAAGCGGG AGATTTAGCT GCGCTTCTTA CTAATCTGGA AGAAAACGAT ATTTTATTTA TCGATGAAAT CCATCGATTA AGTCCTGTAG TAGAAGAGAT ACTGTATCCT GCGATGGAAG ATTACCAATT AGATATTATG ATTGGTGAAG GTCCTGCAGC TCGTTCAATC AAAATTGATT TGCCCCCATT TACATTAATT GGTGCAACCA CCAGAGCCGG TTCTTTGACT TCTCCACTGC GTGACCGTTT TGGTATTGTT CAACGATTAG AATATTACAA AGTAGACGAT TTGCAATATA TCGTTCAACG TAGTGCGGAT TGTTTGAATT TGTCCATGGA ATCAGAGGGC GCATTGGAAG TGGCTCGACG TGCTCGTGGT ACACCACGAA TTGCCAACCG ATTGTTACGT CGAGTTCGTG ATTATGCAGA TGTTATGAGT GACAGTCATA TCTCACCAGA CATAGCAGAT AAGGCATTAA ACATGTTAGA TGTTGATGTG TGTGGGTTTG ATTACATGGA TAGAAAGTTA TTATTGGCAA TCATGGAGAA ATTCAATGGT GGTCCAGTGG GTCTAGATAA CGTAGCCGCT GCAATTGGTG AAGAAAAAGA TACGATTGAA GATGTGATAG AACCTTATTT AATTCAACAA GGCTACCTTC AGAGAACACC AAGAGGGCGT ATTGTGTCAG ATCGAGCCTA TCTTCATTTT GGTATTGATA GACCAGATAA ATAG
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Protein sequence | MIEADRLIAA DNPVFRDEEV IDRAIRPKKL EDYRGQDHVR SQMEIFIKAA QMRQEPLDHL LIFGPPGLGK TTLANIVANE MGVSIRTTSG PVLEKAGDLA ALLTNLEEND ILFIDEIHRL SPVVEEILYP AMEDYQLDIM IGEGPAARSI KIDLPPFTLI GATTRAGSLT SPLRDRFGIV QRLEYYKVDD LQYIVQRSAD CLNLSMESEG ALEVARRARG TPRIANRLLR RVRDYADVMS DSHISPDIAD KALNMLDVDV CGFDYMDRKL LLAIMEKFNG GPVGLDNVAA AIGEEKDTIE DVIEPYLIQQ GYLQRTPRGR IVSDRAYLHF GIDRPDK
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