| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1886 |
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| Symbol | aspS |
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| ID | 6987436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2021027 |
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| End bp | 2022802 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380187 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_002263282 |
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| Protein GI | 209695353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGCC ATTACTGTGG TAACTTGAAC AAGTCCCTTG CAGGACAAAC TGTAGAACTT
TGCGGCTGGG TAAACCGTCG CCGTGATTTA GGCGGTCTTA TCTTCATTGA TATGCGAGAT
CGTGAAGGTG TCGTTCAGGT AGTTGTTGAC CCAGATATGA AAGATATCTT TTCAACTGCT
AACCAACTGC GCAATGAATT CTGTATTAAA TTTACTGGCG AAGTACGTGT TCGTCCTGAC
AGCCAAGTAA ATAAAGATAT GTCTACGGGT GAAGTTGAAC TTTACGCGAC AGGTCTTGAG
ATCATCAACC GTTCTGAAGC ACTTCCATTG GATTTCAATC AAACGAACTC AGAAGAGCAA
CGCCTGAAGT ACCGTTATAT TGATTTACGT CGTCCAGAAA TGAGTGACCG TATCAAGTTA
CGTGCTCGTG CATCTAGCTT TGTTCGTCGT TTCTTAGATG AGAACCTATT CTTAGATATC
GAAACACCAG TACTAACAAA AGCAACGCCA GAAGGCGCTC GTGATTACCT AGTACCAAGC
CGTGTTCATA AAGGCAGCTT CTACGCACTT CCACAATCAC CACAGTTGTT TAAGCAACTT
CTGATGATGT CTGGTTTTGA CCGTTACTAC CAAATCGTTA AATGTTTCCG TGATGAAGAT
TTACGCGCTG ACCGCCAACC TGAATTTACT CAAATAGATA TCGAAACCTC TTTCCTTTCG
TCTAACCAAG TTCGTGATAT TACTGAACGT TTGGTTCATG ACATGTGGAA AGAACTTCTT
GATGTTGAGC TTGGTCAATT TCCAATAATG AAATTCTCTG AAGCGATTCG TCGTTTTGGT
TCTGATAAGC CAGATCTACG TAACCCACTA GAATTAGTGG ACATTGCAGA TCTTCTTAAA
GACGTAGAAT TCCAAGTATT CGCTGGTCCT GCAAATGACG AAAAAGGCCG TGTAGCGGTT
ATTCGTGTTC CTGGTGGCGC ATCGCTTTCT CGTAAGCAAA TTGATGAATA CGGCAAATTT
GTTGGTATTT ACGGCGCGAA AGGCCTTGCT TGGATGAAAG TAAACGATCG TGCTGCTGGT
CTTGAAGGAG TTCAATCTCC TGTTGCTAAA TTCCTAAACG CAGACGTTGT AAATGGTATT
TTAGAACGCA CAGAAGCTGA AAGTGGCGAT ATCATCCTAT TTGGTGCAGA TAAAGCAAAC
ATTGTTTCTG AAGCCATGGG TGCATTACGT ATCAAGCTTG GTGATGACTT AGAACTAACA
GACAAAAAAG CATGGGCACC TCTTTGGGTT ATTGATTTCC CAATGTTTGA AGAAGATGGC
GAAGGTAACT TGCATGCAAT GCACCACCCA TTTACTTCTC CATTAGGCAT GACAGCGGAA
GAGCTTAAAG TAAACCCTGC TGCTGCAAAC TCTGATGCTT ACGATATGGT TATCAACGGC
TATGAAGTTG GTGGTGGCTC TGTACGTATT CACAATGCTG AAATGCAAAC TGCAGTATTC
GGTATCCTAG GTATTGAAGC GAAAGAGCAA CAAGAGAAAT TTGGTTTCTT ACTTGAAGCG
CTTAAATACG GTACGCCGCC ACACGCAGGT CTTGCTTTCG GTCTTGACCG TCTTGCAATG
CTACTTTGCG GTACTGAAAA CATTCGTGAC GTTATTGCAT TCCCTAAAAC AACGGCTGCA
GCATGTTTAC TTACGAATGC TCCAAGCCCT GCGAATCCAG ATTCTCTTGC AGAATTAGCG
ATTGCAGTAA AATTTGCTGA GAAAAAAGAC GCTTAA
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| Protein sequence | MRSHYCGNLN KSLAGQTVEL CGWVNRRRDL GGLIFIDMRD REGVVQVVVD PDMKDIFSTA
NQLRNEFCIK FTGEVRVRPD SQVNKDMSTG EVELYATGLE IINRSEALPL DFNQTNSEEQ
RLKYRYIDLR RPEMSDRIKL RARASSFVRR FLDENLFLDI ETPVLTKATP EGARDYLVPS
RVHKGSFYAL PQSPQLFKQL LMMSGFDRYY QIVKCFRDED LRADRQPEFT QIDIETSFLS
SNQVRDITER LVHDMWKELL DVELGQFPIM KFSEAIRRFG SDKPDLRNPL ELVDIADLLK
DVEFQVFAGP ANDEKGRVAV IRVPGGASLS RKQIDEYGKF VGIYGAKGLA WMKVNDRAAG
LEGVQSPVAK FLNADVVNGI LERTEAESGD IILFGADKAN IVSEAMGALR IKLGDDLELT
DKKAWAPLWV IDFPMFEEDG EGNLHAMHHP FTSPLGMTAE ELKVNPAAAN SDAYDMVING
YEVGGGSVRI HNAEMQTAVF GILGIEAKEQ QEKFGFLLEA LKYGTPPHAG LAFGLDRLAM
LLCGTENIRD VIAFPKTTAA ACLLTNAPSP ANPDSLAELA IAVKFAEKKD A
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