Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1858 |
Symbol | sodB |
ID | 6987426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1993731 |
End bp | 1994315 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380157 |
Product | superoxide dismutase [Fe] |
Protein accession | YP_002263254 |
Protein GI | 209695325 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.850296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTG AATTACCAGC TCTACCGTTC GCAAAAGACG CATTAGAACC ACATATCTCA GCTGAGACTT TAGATTACCA CCACGGCAAA CACCACAACA CTTATGTGGT TAAGCTTAAC GGTCTTATCC CAGGGACTGA ATTTGAAGGC AAGACGCTAG AAGAGATCAT CAAAACTTCT ACTGGCGGTG TTTTTAACAA CGCCGCTCAA ATTTGGAACC ACACGTTCTA CTGGAACTGC CTAGCTCCAA ACGCTGGCGG CCAACCAACA GGCGCTGTCG CTGCTGCAAT CGATGCTGCA TTTGGTTCTT TCGAAGAATT CAAAGCAAAA TTCACAGATT CAGCAATCAA CAACTTTGGT TCTTCTTGGA CTTGGCTTGT TAAAAATGCT GACGGCTCTC TAGCTATCGT TAATACATCT AACGCGGCAA CACCGCTAAC AGATGAAGGT GTAACGCCAC TACTAACTGT TGATCTATGG GAACATGCTT ACTACATTGA TTTCCGTAAC GTTCGTCCTG ATTACATGGG TGCGTTCTGG TCTCTAGTTA ACTGGTCTTT CGTAGAAGAA AACCTAGCTA AGTAA
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Protein sequence | MSFELPALPF AKDALEPHIS AETLDYHHGK HHNTYVVKLN GLIPGTEFEG KTLEEIIKTS TGGVFNNAAQ IWNHTFYWNC LAPNAGGQPT GAVAAAIDAA FGSFEEFKAK FTDSAINNFG SSWTWLVKNA DGSLAIVNTS NAATPLTDEG VTPLLTVDLW EHAYYIDFRN VRPDYMGAFW SLVNWSFVEE NLAK
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